RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 GTPBP2Q9BX10 602 aaKnown RBP20.52■□□□□ 0.88
OTUB1-211ENST00000543004 NUSAP1Q9BXS6 441 aaKnown RBP20.52■□□□□ 0.88
OTUB1-211ENST00000543004 TMEM168Q9H0V1 697 aa20.52■□□□□ 0.88
OTUB1-211ENST00000543004 P2RY12Q9H244 342 aa20.52■□□□□ 0.88
OTUB1-211ENST00000543004 RXFP3Q9NSD7 469 aa20.52■□□□□ 0.88
OTUB1-211ENST00000543004 SLC23A2Q9UGH3 650 aa20.52■□□□□ 0.88
OTUB1-211ENST00000543004 GPSM3Q9Y4H4 160 aa20.52■□□□□ 0.88
OTUB1-211ENST00000543004 CABIN1Q9Y6J0 2220 aa20.52■□□□□ 0.87
OTUB1-211ENST00000543004 GRID2O43424 1007 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 RASGRP1O95267 797 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 CSF2P04141 144 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 IVLP07476 585 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF806P0C7X5 589 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF7P17097 686 aaPredicted RBP20.51■□□□□ 0.87
OTUB1-211ENST00000543004 PHBP35232 272 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 LEPRP48357 1165 aaKnown RBP20.51■□□□□ 0.87
OTUB1-211ENST00000543004 C1orf61Q13536 156 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 GTF2H3Q13889 308 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 CTSL3PQ5NE16 218 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF549Q6P9A3 640 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 EMBQ6PCB8 327 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 CHST15Q7LFX5 561 aaPredicted RBP20.51■□□□□ 0.87
OTUB1-211ENST00000543004 STRA8Q7Z7C7 330 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 C11orf96Q7Z7L8 435 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 PPM1NQ8N819 430 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 LKAAEAR1Q8TD35 194 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 CAVIN3Q969G5 261 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ATXN7L3BQ96GX2 97 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 BIRC8Q96P09 236 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 TCF12Q99081 682 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ELF4Q99607 663 aaPredicted RBP20.51■□□□□ 0.87
OTUB1-211ENST00000543004 TTC1Q99614 292 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ZCCHC2Q9C0B9 1178 aaKnown RBP20.51■□□□□ 0.87
OTUB1-211ENST00000543004 ACSS3Q9H6R3 686 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 GAREM1Q9H706 876 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 SEMA4GQ9NTN9 838 aa20.51■□□□□ 0.87
OTUB1-211ENST00000543004 CFAP99D6REC4 459 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 PRMT5O14744 637 aaPredicted RBP20.5■□□□□ 0.87
OTUB1-211ENST00000543004 TUBBP07437 444 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 RALBP11234 206 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 NME1P15531 152 aaKnown RBP20.5■□□□□ 0.87
OTUB1-211ENST00000543004 ITGB6P18564 788 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 TGM1P22735 817 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 HSD17B3P37058 310 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 BNIP3Q12983 259 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 GALNT13Q8IUC8 556 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 KRT222Q8N1A0 295 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 FAM136AQ96C01 138 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 FUT8Q9BYC5 575 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 CLPBQ9H078 707 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 ERVMER34-1Q9H9K5 563 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 INTS10Q9NVR2 710 aaKnown RBP20.5■□□□□ 0.87
OTUB1-211ENST00000543004 FAM8A1Q9UBU6 413 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 APOBEC3BQ9UH17 382 aaKnown RBP20.5■□□□□ 0.87
OTUB1-211ENST00000543004 DGKBQ9Y6T7 804 aa20.5■□□□□ 0.87
OTUB1-211ENST00000543004 TNFP01375 233 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 PBLDP30039 288 aaPredicted RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 PPARGP37231 505 aaPredicted RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF423Q2M1K9 1284 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 NAPRTQ6XQN6 538 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 LRRTM4Q86VH4 590 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 ACVR1CQ8NER5 493 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 HEXDCQ8WVB3 486 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 NDNQ99608 321 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 LRRC61Q9BV99 259 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 UCKL1Q9NWZ5 548 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 A0A087WUV0 522 aaPredicted RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 SHBGP04278 402 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 ACP5P13686 325 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 AK4P27144 223 aaPredicted RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 PRLHRP49683 370 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 PGGT1BP53609 377 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 PRRT3Q5FWE3 981 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 RBM20Q5T481 1227 aaKnown RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 RNF187Q5TA31 235 aaPredicted RBP20.49■□□□□ 0.87
OTUB1-211ENST00000543004 KIAA0408Q6ZU52 694 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 CDKL2Q92772 493 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 OR2M4Q96R27 311 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 CYTH2Q99418 400 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 SLC13A1Q9BZW2 595 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 RMI1Q9H9A7 625 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 GALPQ9UBC7 116 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 GULP1Q9UBP9 304 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 KCNK6Q9Y257 313 aa20.49■□□□□ 0.87
OTUB1-211ENST00000543004 ARHGEF17Q96PE2 2063 aaPredicted RBP20.48■□□□□ 0.87
OTUB1-211ENST00000543004 NIPSNAP2O75323 286 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 POP7O75817 140 aaKnown RBP20.48■□□□□ 0.87
OTUB1-211ENST00000543004 SYPP08247 313 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 ABHD2P08910 425 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 CTBSQ01459 385 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 BCL7AQ4VC05 210 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF449Q6P9G9 518 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 SLC26A11Q86WA9 606 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 NRROSQ86YC3 692 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 LILRA3Q8N6C8 439 aaPredicted RBP20.48■□□□□ 0.87
OTUB1-211ENST00000543004 MCMBPQ9BTE3 642 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 GPR34Q9UPC5 381 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 DNAJC16Q9Y2G8 782 aa20.48■□□□□ 0.87
OTUB1-211ENST00000543004 RIF1Q5UIP0 2472 aaKnown RBP20.48■□□□□ 0.87
OTUB1-211ENST00000543004 A0A1B0GTQ1 180 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms