RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DDOQ99489 341 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PKP4Q99569 1192 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PIMREGQ9BSJ6 248 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 CDT1Q9H211 546 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ABCG8Q9H221 673 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PPIL3Q9H2H8 161 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 FZD8Q9H461 694 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TSPY26PQ9H489 355 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TASP1Q9H6P5 420 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TMEM206Q9H813 350 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 CHMP1AQ9HD42 196 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TUFT1Q9NNX1 390 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 IARS2Q9NSE4 1012 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PARPBPQ9NWS1 579 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 PLEKHB1Q9UF11 243 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 FETUBQ9UGM5 382 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TBK1Q9UHD2 729 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 IPO11Q9UI26 975 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TSPYL4Q9UJ04 414 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 APPL1Q9UKG1 709 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 ITGA11Q9UKX5 1188 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 FZD1Q9UP38 647 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TRIM17Q9Y577 477 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 MIA2Q96PC5 1412 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 TIAM1Q13009 1591 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 NWD1Q149M9 1564 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 INO80Q9ULG1 1556 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 AFF2P51816 1311 aa3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 NKTRP30414 1462 aaKnown RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 COL16A1Q07092 1604 aaPredicted RBP3.92□□□□□ -1.78
SFSWAP-211ENST00000542813 STRCP1A6NGW2 1772 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 MSH6P52701 1360 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SYCP2Q9BX26 1530 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 TRBV5-7A0A0A0MS05 114 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 A0A1W2PPM1 405 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SYCE3A1L190 88 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 C17orf102A2RUQ5 167 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM86B1E9PN63 330 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PLOD2O00469 737 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 NDC80O14777 642 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PHLPP1O60346 1717 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PRAMEF11O60813 436 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ICAM1P05362 532 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM86B2P0C5J1 330 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 UROSP10746 265 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 UNGP13051 313 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 CDC25CP30307 473 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 HOXA7P31268 230 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SOAT1P35610 550 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ANP32AP39687 249 aaKnown RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 KCNJ1P48048 391 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 KHKP50053 298 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 LUMP51884 338 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 NME5P56597 212 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ST8SIA6P61647 398 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 BLOC1S1P78537 153 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 HOXA4Q00056 320 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SPOCK1Q08629 439 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PMPCAQ10713 525 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PKP1Q13835 747 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 C2orf68Q2NKX9 166 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 HFEQ30201 348 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ALG10Q5BKT4 473 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ALG10BQ5I7T1 473 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ETFRF1Q6IPR1 90 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ZBTB49Q6ZSB9 765 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 DZIP1Q86YF9 867 aaKnown RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 CLYBLQ8N0X4 340 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC44A3Q8N4M1 653 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 CMASQ8NFW8 434 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 OR7G3Q8NG95 312 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 C9orf43Q8TAL5 461 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ZFAND2BQ8WV99 257 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 FRAT1Q92837 279 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 DNASE1L2Q92874 299 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SPSB1Q96BD6 273 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 OTULINQ96BN8 352 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ZNF419Q96HQ0 510 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ZNF570Q96NI8 536 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 KATNB1Q9BVA0 655 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 TM2D2Q9BX73 214 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 KRT23Q9C075 422 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 MVB12BQ9H7P6 319 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 GPR108Q9NPR9 543 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 EQTNQ9NQ60 294 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 PRMT7Q9NVM4 692 aaPredicted RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ANKRD10Q9NXR5 420 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 CPSF3Q9UKF6 684 aaKnown RBP3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 SNX7Q9UNH6 387 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 CHKBQ9Y259 395 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 WNT6Q9Y6F9 365 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 NHSL1Q5SYE7 1610 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 RNF123Q5XPI4 1314 aa3.91□□□□□ -1.78
SFSWAP-211ENST00000542813 ZC3H13Q5T200 1668 aaKnown RBP3.9□□□□□ -1.78
SFSWAP-211ENST00000542813 ABCC3O15438 1527 aa3.9□□□□□ -1.78
SFSWAP-211ENST00000542813 CCNB3Q8WWL7 1395 aa3.9□□□□□ -1.78
SFSWAP-211ENST00000542813 FMN1Q68DA7 1419 aa3.9□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC22A23A1A5C7 686 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms