RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PNMA8CA0A1B0GUJ8 204 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 A0A1B0GVM2 712 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 TCAF2A6NFQ2 919 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 PDZK1P1A8MUH7 402 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 H3BN98 237 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 K7ERQ8 282 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 FYNP06241 537 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 HCAR3P49019 387 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 SLC11A1P49279 550 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 NAE1Q13564 534 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 GTF2H2Q13888 395 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 GTF2H2CQ6P1K8 395 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 USP45Q70EL2 814 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 RBFAQ8N0V3 343 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 LIX1Q8N485 282 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 PTCD2Q8WV60 388 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 REXO5Q96IC2 774 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 STK16O75716 305 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 CSKP41240 450 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 HIST2H2ACQ16777 129 aaPredicted RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 HIST2H2AA3Q6FI13 130 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 IFNLR1Q8IU57 520 aaPredicted RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 ZCCHC7Q8N3Z6 543 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 MZB1Q8WU39 189 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 DTNBP1Q96EV8 351 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 PPP3R2Q96LZ3 170 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 HOPXQ9BPY8 73 aaPredicted RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 WRAP53Q9BUR4 548 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 LRTM1Q9HBL6 345 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.93■□□□□ 0.149e-8■□□□□ 9
VARS2-212ENST00000542001 SAP18O00422 153 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 CCL16O15467 120 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 VPS4BO75351 444 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 CHRM5P08912 532 aaPredicted RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 ACRP10323 421 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 FUT4P22083 530 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 RPS9P46781 194 aaKnown RBP15.93■□□□□ 0.14
VARS2-212ENST00000542001 GNPDA1P46926 289 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 SERPINB10P48595 397 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 GSK3BP49841 420 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 CTC1Q2NKJ3 1217 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 PKDCCQ504Y2 493 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 FIBCD1Q8N539 461 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 LRRC58Q96CX6 371 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 KLHL25Q9H0H3 589 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 DAPK2Q9UIK4 370 aa15.93■□□□□ 0.14
VARS2-212ENST00000542001 GRID2O43424 1007 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 CDK14O94921 469 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 POU2F1P14859 743 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 S100A5P33763 92 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SNRPD1P62314 119 aaKnown RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 PTGR1Q14914 329 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SETMARQ53H47 684 aaPredicted RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 MBOAT1Q6ZNC8 495 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 CYP4V2Q6ZWL3 525 aaPredicted RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 C2CD4AQ8NCU7 369 aaPredicted RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.92■□□□□ 0.143e-13■■□□□ 12.4
VARS2-212ENST00000542001 GALNT8Q9NY28 637 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 PRORSD1PA6NEY8 169 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 EPN2O95208 641 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 IL1BP01584 269 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SELPP16109 830 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 PCYT1AP49585 367 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 TMED10P49755 219 aaKnown RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 PGFP49763 221 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 FOXA1P55317 472 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 ZBTB6Q15916 424 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 STEAP4Q687X5 459 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SCD5Q86SK9 330 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 PGBD3Q8N328 593 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SFRP1Q8N474 314 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 STX19Q8N4C7 294 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 LZICQ8WZA0 190 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 CDK5RAP1Q96SZ6 601 aaKnown RBP15.92■□□□□ 0.14
VARS2-212ENST00000542001 SPG21Q9NZD8 308 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 ARAP2Q8WZ64 1704 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 A0A1W2PRU2 124 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 G6PDP11413 515 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 EPORP19235 508 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 FKBP1BP68106 108 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 PHACTR4Q8IZ21 702 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 MAGEH1Q9H213 219 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 CXorf21Q9HAI6 301 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 SH3GLB1Q9Y371 365 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 DYRK1BQ9Y463 629 aa15.92■□□□□ 0.14
VARS2-212ENST00000542001 BHMG1C9JSJ3 638 aaPredicted RBP15.91■□□□□ 0.14
VARS2-212ENST00000542001 G3V2T6 193 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 ARPC2O15144 300 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 DBTP11182 482 aaKnown RBP15.91■□□□□ 0.14
VARS2-212ENST00000542001 GABRB3P28472 473 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 INHBEP58166 350 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 GALNT15Q8N3T1 639 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 KDM1BQ8NB78 822 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 HJURPQ8NCD3 748 aaPredicted RBP15.91■□□□□ 0.14
VARS2-212ENST00000542001 ZNF540Q8NDQ6 660 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 OR52B6Q8NGF0 335 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 GBAP04062 536 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 BNIP2Q12982 314 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 PSAPL1Q6NUJ1 521 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms