RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SNX12Q9UMY4 172 aa9.61□□□□□ -0.87
CHFR-220ENST00000541817 NOVA2Q9UNW9 492 aaKnown RBP9.61□□□□□ -0.87
CHFR-220ENST00000541817 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CCDC78A2IDD5 438 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 GRID2O43424 1007 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 RAMP2O60895 175 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 JRKO75564 520 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 SASH3O75995 380 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 TNFAIP3P21580 790 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 OTX2P32243 289 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 ETFBP38117 255 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 ETV3P41162 512 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 EPHA4P54764 986 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 PPP1CAP62136 330 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 VSNL1P62760 191 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 PDE1BQ01064 536 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 SLC6A3Q01959 620 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CDC16Q13042 620 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 PEX6Q13608 980 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 AFMIDQ63HM1 303 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 DPPA4Q7L190 304 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CHST15Q7LFX5 561 aaPredicted RBP9.6□□□□□ -0.87
CHFR-220ENST00000541817 HSD11B1LQ7Z5J1 315 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 SLC9B2Q86UD5 537 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CHTF18Q8WVB6 975 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 SH3KBP1Q96B97 665 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 NSMCE3Q96MG7 304 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CRACR2AQ9BSW2 395 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 MAGEH1Q9H213 219 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 GANQ9H2C0 597 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 STN1Q9H668 368 aaKnown RBP9.6□□□□□ -0.87
CHFR-220ENST00000541817 CPNE7Q9UBL6 633 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 SUCOQ9UBS9 1254 aaKnown RBP9.6□□□□□ -0.87
CHFR-220ENST00000541817 B4GALT6Q9UBX8 382 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 ZNHIT2Q9UHR6 403 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 CD84Q9UIB8 345 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 TCFL5Q9UL49 500 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
CHFR-220ENST00000541817 TTC24A2A3L6 582 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 GTPBP10A4D1E9 387 aaKnown RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 CFAP69A5D8W1 941 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 MED7O43513 233 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 UBXN7O94888 489 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 ASMTLO95671 621 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 C8BP07358 591 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 EBLN1P0CF75 366 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 GNA15P30679 374 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 TNNT3P45378 269 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 FMO5P49326 533 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 RRADP55042 308 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 FOXD4Q12950 439 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 CASP8Q14790 479 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 MYBPC3Q14896 1274 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 CNGA3Q16281 694 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 SLC18A3Q16572 532 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 EXOC3L4Q17RC7 722 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 TMEM198Q66K66 360 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 TRNP1Q6NT89 227 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 IRGCQ6NXR0 463 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 BRAT1Q6PJG6 821 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 IGFL3Q6UXB1 125 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 SPOCD1Q6ZMY3 1216 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 Q6ZVL8 140 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 ZNF765Q7L2R6 523 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 ZNF572Q7Z3I7 529 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 DNAAF5Q86Y56 855 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 SIDT2Q8NBJ9 832 aaKnown RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 C1orf131Q8NDD1 294 aaKnown RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 HCAR2Q8TDS4 363 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 KLHL6Q8WZ60 621 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 RSC1A1Q92681 617 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 SLC35C1Q96A29 364 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 CNDP1Q96KN2 507 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 OSBPL9Q96SU4 736 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 NOL6Q9H6R4 1146 aaKnown RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 VIPAS39Q9H9C1 493 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 PDE7BQ9NP56 450 aa9.59□□□□□ -0.87
CHFR-220ENST00000541817 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 PPARGC1AQ9UBK2 798 aaKnown RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
CHFR-220ENST00000541817 IGHV5-51A0A0C4DH38 117 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 BTNL10A8MVZ5 291 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 CCDC172P0C7W6 258 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 ACP5P13686 325 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 FERP16591 822 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 RHOQP17081 205 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 NELFEP18615 380 aaKnown RBP9.58□□□□□ -0.88
CHFR-220ENST00000541817 USP8P40818 1118 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 GPR1P46091 355 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 MAPKAPK2P49137 400 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 IST1P53990 364 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 FOXL2P58012 376 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 PPP2R2AP63151 447 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 C2orf54Q08AI8 447 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 PTPN20Q4JDL3 420 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 GLE1Q53GS7 698 aaKnown RBP9.58□□□□□ -0.88
CHFR-220ENST00000541817 KLHDC7AQ5VTJ3 777 aa9.58□□□□□ -0.88
CHFR-220ENST00000541817 IZUMO3Q5VZ72 239 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms