RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 VSTM4Q8IW00 320 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 ESX1Q8N693 406 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 RSC1A1Q92681 617 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 CCDC42Q96M95 316 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 TGM7Q96PF1 710 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 ULBP3Q9BZM4 244 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 BPIFA1Q9NP55 256 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 WASH6PQ9NQA3 447 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 SAE1Q9UBE0 346 aaPredicted RBP12.3□□□□□ -0.44
VAMP1-206ENST00000538970 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
VAMP1-206ENST00000538970 LOC285095A0A1B0GVY8 99 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 TNNT1P13805 278 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF28P17035 718 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 AMD1P17707 334 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 NFKB1P19838 968 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 COMTP21964 271 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 IDSP22304 550 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 NR2C2P49116 596 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 SEPHS1P49903 392 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 WNT3AP56704 352 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 SH3BP2P78314 561 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 MC1RQ01726 317 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 GTF2H3Q13889 308 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 NOMO1Q15155 1222 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 C4orf17Q53FE4 359 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 ATP1A1-AS1Q5TC04 95 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 RBM12BQ8IXT5 1001 aaKnown RBP12.29□□□□□ -0.44
VAMP1-206ENST00000538970 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 DTX3LQ8TDB6 740 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 TFB1MQ8WVM0 346 aaKnown RBP12.29□□□□□ -0.44
VAMP1-206ENST00000538970 CXorf40BQ96DE9 158 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 OR6C1Q96RD1 312 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 EPN3Q9H201 632 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 IL26Q9NPH9 171 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 FAM153AQ9UHL3 310 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 WDR37Q9Y2I8 494 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
VAMP1-206ENST00000538970 ZNF106Q9H2Y7 1883 aaKnown RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 GPR39O43194 453 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 SPOPO43791 374 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 KIF1CO43896 1103 aaKnown RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 CST8O60676 142 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 RASSF9O75901 435 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 EPOP01588 193 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 TPM1P09493 284 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 VCLP18206 1134 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 TCN2P20062 427 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 F8A1P23610 371 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 SPAM1P38567 509 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 CHRNA4P43681 627 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 ADCY2Q08462 1091 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 TFDP2Q14188 446 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 IL11RAQ14626 422 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 DEFB109BQ30KR1 87 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 SIRPB2Q5JXA9 342 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 GDAP1Q8TB36 358 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 RNF31Q96EP0 1072 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 OXNAD1Q96HP4 312 aaPredicted RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 RAB33BQ9H082 229 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 IL17CQ9P0M4 197 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 INTUQ9ULD6 942 aa12.28□□□□□ -0.44
VAMP1-206ENST00000538970 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
VAMP1-206ENST00000538970 MTSS1O43312 755 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 PSTPIP1O43586 416 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 KIAA0754O94854 1291 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 NDUFA10O95299 355 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 FGF5P12034 268 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 CA5AP35218 305 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 DLSTP36957 453 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 CASRP41180 1078 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 HALP42357 657 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 DMPKQ09013 629 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 LLGL1Q15334 1064 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 SKIDA1Q1XH10 827 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 CACHD1Q5VU97 1274 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 ZDHHC20Q5W0Z9 365 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 KAZNQ674X7 775 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 IRGCQ6NXR0 463 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 C16orf46Q6P387 395 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 C6orf15Q6UXA7 325 aaPredicted RBP12.27□□□□□ -0.45
VAMP1-206ENST00000538970 FAM151BQ6UXP7 276 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 FAM92BQ6ZTR7 304 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 GLT6D1Q7Z4J2 308 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 RASGRP3Q8IV61 690 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 GALNT6Q8NCL4 622 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 DDHD1Q8NEL9 900 aa12.27□□□□□ -0.45
VAMP1-206ENST00000538970 GPR150Q8NGU9 434 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms