RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 KDELC2Q7Z4H8 507 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 CLIP4Q8N3C7 705 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 DPP10Q8N608 796 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 PNPLA1Q8N8W4 532 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 CLSTN3Q9BQT9 956 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 ULBP1Q9BZM6 244 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 TKTL2Q9H0I9 626 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
SFSWAP-207ENST00000538548 FAM234BA2RU67 622 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 PIRO00625 290 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 CRCPO75575 148 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 MTHFD2P13995 350 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 PM20D1Q6GTS8 502 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 MCOLN3Q8TDD5 553 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 SMOC2Q9H3U7 446 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 ABCB10Q9NRK6 738 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 ZIM2Q9NZV7 527 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 GJD2Q9UKL4 321 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 UGT2A1Q9Y4X1 527 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 CEP350Q5VT06 3117 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 SAGE2PA6NJ88 616 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 CNTN5O94779 1100 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 F9P00740 461 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 CST1P01037 141 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 DAOAP59103 153 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 ARPC4P59998 168 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 CARTPTQ16568 116 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF181Q2M3W8 571 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 KIAA0319Q5VV43 1072 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 RIOX2Q8IUF8 465 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 LRRC49Q8IUZ0 686 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 HS3ST5Q8IZT8 346 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 RYBPQ8N488 228 aaPredicted RBP18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 AADATQ8N5Z0 425 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 FBLIM1Q8WUP2 373 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF560Q96MR9 790 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 TRIT1Q9H3H1 467 aaKnown RBP18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 TMEM45AQ9NWC5 275 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 SMPD4Q9NXE4 827 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 SLCO3A1Q9UIG8 710 aa18.4■□□□□ 0.54
SFSWAP-207ENST00000538548 UNCXA6NJT0 531 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 XPNPEP2O43895 674 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 NCS1P62166 190 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 CDK5R2Q13319 367 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 SYT6Q5T7P8 510 aaPredicted RBP18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 PAQR9Q6ZVX9 377 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 GALNT13Q8IUC8 556 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 RHEBL1Q8TAI7 183 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 COPS5Q92905 334 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 RGS18Q9NS28 235 aa18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 UBQLN1Q9UMX0 589 aaKnown RBP18.39■□□□□ 0.54
SFSWAP-207ENST00000538548 MIA3Q5JRA6 1907 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 A0A1B0GTL3 188 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 MATN3O15232 486 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC16A6O15403 523 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 S1PR4O95977 384 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 BMP1P13497 986 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 CXCR3P49682 368 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 KCTD2Q14681 263 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 OR4D1Q15615 310 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 SPESP1Q6UW49 350 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 LBX2Q6XYB7 198 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 REXO5Q96IC2 774 aaKnown RBP18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 NEK6Q9HC98 313 aa18.39■□□□□ 0.53
SFSWAP-207ENST00000538548 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 SLC7A4O43246 635 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 KCNK2O95069 426 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ANGPTL1O95841 491 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 DLGAP3O95886 979 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 HLA-DQB2P05538 268 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 FDXRP22570 491 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 IL12AP29459 219 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ST13P50502 369 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 XKR7Q5GH72 579 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 TUBA3EQ6PEY2 450 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 DLEU7Q6UYE1 221 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 LDB1Q86U70 411 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ARHGAP12Q8IWW6 846 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 GPC2Q8N158 579 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ELMOD1Q8N336 334 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 CHAC2Q8WUX2 184 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 CCDC115Q96NT0 180 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 TMEM209Q96SK2 561 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 NACA2Q9H009 215 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 FAM49AQ9H0Q0 323 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 CARS2Q9HA77 564 aaKnown RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 OSGIN1Q9UJX0 560 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 PCDHGA10Q9Y5H3 936 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 SOCS7O14512 581 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 GNGT2O14610 69 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 HS6ST1O60243 411 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 MAFKO60675 156 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 SNX2O60749 519 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 PAPSS2O95340 614 aaPredicted RBP18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 PTTG1O95997 202 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 MAP3K7CLP57077 242 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 MTPNP58546 118 aa18.38■□□□□ 0.53
SFSWAP-207ENST00000538548 ERVK-8P63133 956 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms