RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DNMT3LQ9UJW3 386 aa14.17□□□□□ -0.14
USP44-203ENST00000537435 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
USP44-203ENST00000537435 KANSL1LA0AUZ9 987 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 IQCF5A8MTL0 148 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 E5RI56 91 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 CBX4O00257 560 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 PFDN6O15212 129 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 STX7O15400 261 aaKnown RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 RHOCP08134 193 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 HTR1EP28566 365 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ATP5C1P36542 298 aaKnown RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 ARL1P40616 181 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 SGSHP51688 502 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 EMX2Q04743 252 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 TGFBIQ15582 683 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ATP6AP1LQ52LC2 224 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 CLVS1Q8IUQ0 354 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 OFCC1Q8IZS5 231 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 DHRSXQ8N5I4 330 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 ZNF382Q96SR6 550 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 C8orf4Q9NR00 106 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 MARCH5Q9NX47 278 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ANKRD66B4E2M5 251 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 GPR39O43194 453 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 GJB5O95377 273 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 F11P03951 625 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ATF6P18850 670 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 HRH2P25021 359 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 CST5P28325 142 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 PRKCZQ05513 592 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 RTP2Q5QGT7 225 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 LETMD1Q6P1Q0 360 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ZFAND4Q86XD8 727 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 ABI1Q8IZP0 508 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 DRAXINQ8NBI3 349 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 MAGEE2Q8TD90 523 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 ADAMTS16Q8TE57 1224 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 KCNJ9Q92806 393 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 BIRC7Q96CA5 298 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 CD320Q9NPF0 282 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 SMPD3Q9NY59 655 aaPredicted RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 HCSTQ9UBK5 93 aa14.16□□□□□ -0.14
USP44-203ENST00000537435 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
USP44-203ENST00000537435 GREB1Q4ZG55 1949 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 TRIM64A6NGJ6 449 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 CLDN11O75508 207 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 LDLRP01130 860 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ENO2P09104 434 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 CD9P21926 228 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 CAPGP40121 348 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 RPS9P46781 194 aaKnown RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 HTR6P50406 440 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 GATMP50440 423 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 CLCN4P51793 760 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 OR4D2P58180 307 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 PRKG2Q13237 762 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ZBED5Q49AG3 693 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 RGMBQ6NW40 437 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 SFRP1Q8N474 314 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 VPS50Q96JG6 964 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 HBEGFQ99075 208 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 LRRC3Q9BY71 257 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 SOX17Q9H6I2 414 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 EBF1Q9UH73 591 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 BRCA2P51587 3418 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 NT5C1B-RDH14C9J2C7 533 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 CAPN1P07384 714 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 VARSP26640 1264 aaKnown RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 TRAF2Q12933 501 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ZNF177Q13360 481 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 DCTN2Q13561 401 aaKnown RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 C18orf21Q32NC0 220 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 CYBRD1Q53TN4 286 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 FUT10Q6P4F1 479 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ABRAXAS1Q6UWZ7 409 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 RALGPS2Q86X27 583 aaPredicted RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 PROSER1Q86XN7 944 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 HID1Q8IV36 788 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 METTL6Q8TCB7 284 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ISG20Q96AZ6 181 aaKnown RBP14.15□□□□□ -0.14
USP44-203ENST00000537435 ISOC1Q96CN7 298 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 CHID1Q9BWS9 393 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 ADGRE3Q9BY15 652 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 PREBQ9HCU5 417 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
USP44-203ENST00000537435 FRMPD3Q5JV73 1810 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 ILVBLA1L0T0 632 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 SNAP91O60641 907 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 ALDH2P05091 517 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 SLC11A1P49279 550 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 EMP3P54852 163 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 CTBSQ01459 385 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 PYCR3Q53H96 274 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 GLYATQ6IB77 296 aa14.14□□□□□ -0.15
USP44-203ENST00000537435 IL27RAQ6UWB1 636 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms