RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HOXB1P14653 301 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FMO4P31512 558 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 RGS4P49798 205 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF143P52747 638 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MXD1Q05195 221 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 IL18Q14116 193 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF267Q14586 743 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CREB3L2Q70SY1 520 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 LILRA2Q8N149 483 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 OR2T12Q8NG77 320 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CPB2Q96IY4 423 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 VAT1Q99536 393 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MRPL57Q9BQC6 102 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM246Q9BRR3 403 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GATA5Q9BWX5 397 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TMLHEQ9NVH6 421 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 B3GNT2Q9NY97 397 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MALT1Q9UDY8 824 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SAMHD1Q9Y3Z3 626 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PCDHGA11Q9Y5H2 935 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 RGPD2P0DJD1 1756 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 A8MU76 341 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 H3BMM5 538 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 AZIN1O14977 448 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CA12O43570 354 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 METTL18O95568 372 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GSTM1P09488 218 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SLC2A3P11169 496 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ITGB6P18564 788 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GTF2A2P52657 109 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ACLYP53396 1101 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SLC6A3Q01959 620 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SCN1BQ07699 218 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SELENBP1Q13228 472 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PON2Q15165 354 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 BTBD16Q32M84 506 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZACNQ401N2 412 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF404Q494X3 552 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MSS51Q4VC12 460 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CCDC58Q4VC31 144 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TPRG1LQ5T0D9 272 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MPZL3Q6UWV2 235 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZYG11AQ6WRX3 759 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MINDY1Q8N5J2 469 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 OR13J1Q8NGT2 312 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CRYGNQ8WXF5 182 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MYLPFQ96A32 169 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SH3KBP1Q96B97 665 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZSCAN5AQ9BUG6 496 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NT5MQ9NPB1 228 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SMOXQ9NWM0 555 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 NKIRAS2Q9NYR9 191 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MAPRE3Q9UPY8 281 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 POLR3HQ9Y535 204 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TGM6O95932 706 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 MYL12AP19105 171 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ELK4P28324 431 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CCR1P32246 355 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 UGT2B10P36537 528 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 LIMK2P53671 638 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 VBP1P61758 197 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PIGFQ07326 219 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FSCN1Q16658 493 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FAM209AQ5JX71 171 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 IKBIPQ70UQ0 350 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 C4orf19Q8IY42 314 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ADGRF2Q8IZF7 708 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 JPH3Q8WXH2 748 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF566Q969W8 418 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 GBA2Q9HCG7 927 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 KLHL21Q9UJP4 597 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CICQ96RK0 1608 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ALS2Q96Q42 1657 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FAM240BA0A1B0GVZ2 78 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 EFCAB9A8MZ26 197 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 EFCAB14O75071 495 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 BCAS1O75363 584 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 LRIG2O94898 1065 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SERPIND1P05546 499 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 C2P06681 752 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TCF4P15884 667 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 HOXD11P31277 338 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 RPL38P63173 70 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 RHAGQ02094 409 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 FADDQ13158 208 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CDONQ4KMG0 1287 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SMUG1Q53HV7 270 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF549Q6P9A3 640 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 USP43Q70EL4 1123 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 KRT74Q7RTS7 529 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CYP4Z1Q86W10 505 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 PSTKQ8IV42 348 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 CDYL2Q8N8U2 506 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 TRNT1Q96Q11 434 aaKnown RBP5.35□□□□□ -1.55
PTPRD-213ENST00000537002 VPS35Q96QK1 796 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 HTATIP2Q9BUP3 242 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 KIFC1Q9BW19 673 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 ALG2Q9H553 416 aa5.35□□□□□ -1.55
PTPRD-213ENST00000537002 SOX17Q9H6I2 414 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms