RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GPR18Q14330 331 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 LPAL2Q16609 132 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 AP5B1Q2VPB7 878 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 ZNF528Q3MIS6 628 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 DCLRE1AQ6PJP8 1040 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 ECHDC2Q86YB7 292 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 HORMAD2Q8N7B1 307 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 ZBTB44Q8NCP5 570 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 HDAC7Q8WUI4 952 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 CCT6BQ92526 530 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 TBC1D20Q96BZ9 403 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 RPP25Q9BUL9 199 aaKnown RBP5.6□□□□□ -1.51
CLIP1-207ENST00000536634 IFT27Q9BW83 186 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 CTDSP1Q9GZU7 261 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 ITM2CQ9NQX7 267 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 NCKIPSDQ9NZQ3 722 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 UBIAD1Q9Y5Z9 338 aa5.6□□□□□ -1.51
CLIP1-207ENST00000536634 TENM4Q6N022 2769 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 A0A1B0GVT2 93 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 TARSL2A2RTX5 802 aaKnown RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 TMEM247A6NEH6 219 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 SLC30A4O14863 429 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 RFPL2O75678 378 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 C22orf31O95567 290 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 METTL18O95568 372 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 LCATP04180 440 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 CYP1A2P05177 515 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 CNPP09543 421 aaKnown RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 ARSBP15848 533 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 RXRAP19793 462 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 TKTP29401 623 aaKnown RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 CDC25AP30304 524 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 MTNR1AP48039 350 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 PPP3CCP48454 512 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 CRYBB1P53674 252 aaPredicted RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 STARD6P59095 220 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 ITGB3BPQ13352 177 aaPredicted RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 HTR4Q13639 388 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 UBE2SQ16763 222 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 AADACL2Q6P093 401 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 C15orf39Q6ZRI6 1047 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 MEPCEQ7L2J0 689 aaKnown RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 PLPPR4Q7Z2D5 763 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 CAMK1DQ8IU85 385 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 MIB2Q96AX9 1013 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 EVI5LQ96CN4 794 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 IGSF21Q96ID5 467 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 ZNF479Q96JC4 524 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 KLHL5Q96PQ7 755 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 HIPK2Q9H2X6 1198 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 KLHL31Q9H511 634 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 AZI2Q9H6S1 392 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 WDR6Q9NNW5 1121 aaKnown RBP5.59□□□□□ -1.51
CLIP1-207ENST00000536634 SLC9A2Q9UBY0 812 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 DNAJB4Q9UDY4 337 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 ANGPTL2Q9UKU9 493 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 DERAQ9Y315 318 aa5.59□□□□□ -1.51
CLIP1-207ENST00000536634 MYH9P35579 1960 aaKnown RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 WDR81Q562E7 1941 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 MTCL1Q9Y4B5 1905 aaKnown RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CFAP46Q8IYW2 2715 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 IGKV6D-21A0A0A0MT36 114 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 KANSL1LA0AUZ9 987 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 ANHXE9PGG2 379 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CCER2I3L3R5 266 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 RGS14O43566 566 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CCNE2O96020 404 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 GALTP07902 379 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 TDGF1P13385 188 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CPA1P15085 419 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CD72P21854 359 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 PTPN9P43378 593 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 SLC11A1P49279 550 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CLCN3P51790 818 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 TROAPQ12815 778 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 BYSLQ13895 437 aaKnown RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 IL13RA2Q14627 380 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 SH2D4BQ5SQS7 431 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 N4BP2L1Q5TBK1 243 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 DCAF12L2Q5VW00 463 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 GET4Q7L5D6 327 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 WDR5BQ86VZ2 330 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CCDC60Q8IWA6 550 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CADM3Q8N126 398 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CEP70Q8NHQ1 597 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 FGF14Q92915 247 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 SECISBP2LQ93073 1101 aaKnown RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 ZNF707Q96C28 371 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CDHR1Q96JP9 859 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 APOLD1Q96LR9 279 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 UBAC1Q9BSL1 405 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 CXorf56Q9H5V9 222 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 PRMT8Q9NR22 394 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 TBC1D13Q9NVG8 400 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 PCDHA7Q9UN72 937 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 DNAJC16Q9Y2G8 782 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 PTGDR2Q9Y5Y4 395 aa5.58□□□□□ -1.52
CLIP1-207ENST00000536634 MORC2Q9Y6X9 1032 aaPredicted RBP5.58□□□□□ -1.52
CLIP1-207ENST00000536634 COL1A2P08123 1366 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 NOTCH4Q99466 2003 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms