RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 TLR1Q15399 786 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 OGFOD2Q6N063 350 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLCO6A1Q86UG4 719 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 REXO2Q9Y3B8 237 aaKnown RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLC22A3O75751 556 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PHYKPLQ8IUZ5 450 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PIK3C3Q8NEB9 887 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SCLYQ96I15 445 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLC28A3Q9HAS3 691 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.53□□□□□ -0.4
SPG11-203ENST00000535302 FPGTO14772 594 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 IFI30P13284 250 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TUSC3Q13454 348 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 LRRC38Q5VT99 294 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ANKRD22Q5VYY1 191 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 SEMA3GQ9NS98 782 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 TRAF6Q9Y4K3 522 aa12.53□□□□□ -0.4
SPG11-203ENST00000535302 APODP05090 189 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 TACR2P21452 398 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 HOXC12P31275 282 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 EIF1AXP47813 144 aaKnown RBP12.52□□□□□ -0.4
SPG11-203ENST00000535302 PDK4Q16654 411 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 SLC8B1Q6J4K2 584 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 IRGCQ6NXR0 463 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 GIPC3Q8TF64 312 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 AUTS2Q8WXX7 1259 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 MMADHCQ9H3L0 296 aaPredicted RBP12.52□□□□□ -0.4
SPG11-203ENST00000535302 MCCC2Q9HCC0 563 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 IFT46Q9NQC8 304 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 ENOPH1Q9UHY7 261 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 MICAL3Q7RTP6 2002 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 PLIN3O60664 434 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 UNC5CO95185 931 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 C5orf22Q49AR2 442 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 RTL4Q6ZR62 310 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 ADAMTSL2Q86TH1 951 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 SPOCK2Q92563 424 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 CD101Q93033 1021 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.4
SPG11-203ENST00000535302 GPR25O00155 361 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 CLPXO76031 633 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 SELPP16109 830 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 ODF4Q2M2E3 257 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 SH3PXD2AQ5TCZ1 1133 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 BHLHB9Q6PI77 547 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 KCNE2Q9Y6J6 123 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 RPP40O75818 363 aaKnown RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 DRD4P21917 467 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 HSPA7P48741 367 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 ZNF135P52742 658 aaPredicted RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 RIN1Q13671 783 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 PCED1BQ96HM7 432 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 ACTL7BQ9Y614 415 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 SMIM35A0A1B0GVV1 85 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 LRRC72A6NJI9 287 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 C4BPAP04003 597 aaKnown RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 VPS26BQ4G0F5 336 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 COQ8BQ96D53 544 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 Q96MT0 163 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 URADA6NGE7 173 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 FGF1P05230 155 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 ALOX5P09917 674 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 S100A1P23297 94 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 RNF144AP50876 292 aaPredicted RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 RAB2AP61019 212 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 DHDDSQ86SQ9 333 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 DUS2Q9NX74 493 aaKnown RBP12.52□□□□□ -0.41
SPG11-203ENST00000535302 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 IRAK3Q9Y616 596 aa12.52□□□□□ -0.41
SPG11-203ENST00000535302 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 HDAC3O15379 428 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 NMBRP28336 390 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 BEND5Q7L4P6 421 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 SEC14L3Q9UDX4 400 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 hCG_2039718K7EN88 272 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 SUV39H1O43463 412 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 AKAP8O43823 692 aaKnown RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 MCCD1P59942 119 aaPredicted RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 ZDHHC20Q5W0Z9 365 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 ALG1LQ6GMV1 187 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms