RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ANKZF1Q9H8Y5 726 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 MRPL44Q9H9J2 332 aaKnown RBP4.29□□□□□ -1.72
ITGB1-219ENST00000534049 C12orf4Q9NQ89 552 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 FSCN3Q9NQT6 498 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 SH3GLB2Q9NR46 395 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 FARSBQ9NSD9 589 aaKnown RBP4.29□□□□□ -1.72
ITGB1-219ENST00000534049 ABCF3Q9NUQ8 709 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 HAUS2Q9NVX0 235 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 GIN1Q9NXP7 522 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 EHD2Q9NZN4 543 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 SELENONQ9NZV5 590 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 PA2G4Q9UQ80 394 aaKnown RBP4.29□□□□□ -1.72
ITGB1-219ENST00000534049 LAMP3Q9UQV4 416 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 TNFSF13BQ9Y275 285 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 TMEM5Q9Y2B1 443 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 ANGPTL3Q9Y5C1 460 aa4.29□□□□□ -1.72
ITGB1-219ENST00000534049 MYO3BQ8WXR4 1341 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GOLGA8QA0A0J9YX86 632 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GOLGA8OA6NCC3 632 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GMNCA6NCL1 334 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GOLGA8NF8WBI6 632 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 M0QZQ0 153 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 PCDH17O14917 1159 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ATG13O75143 517 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 KLHL2O95198 593 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 LARGE1O95461 756 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 IFNA2P01563 188 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 KLKB1P03952 638 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ANXA6P08133 673 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 MYL3P08590 195 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 CYP3A4P08684 503 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 RPS17P08708 135 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ZNF12P17014 697 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 STAT1P42224 750 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 MTHFRP42898 656 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 RGS7P49802 495 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 HSD17B4P51659 736 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 AP3M2P53677 418 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GBE1Q04446 702 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 TRIM14Q14142 442 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 STK38Q15208 465 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 CNPY1Q3B7I2 92 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 TMEM95Q3KNT9 176 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 CDONQ4KMG0 1287 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 PPP6R3Q5H9R7 873 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 KIAA1755Q5JYT7 1200 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ZNF569Q5MCW4 686 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SNRNP48Q6IEG0 339 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 METTL2BQ6P1Q9 378 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 RAPH1Q70E73 1250 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 GALNT7Q86SF2 657 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 CD302Q8IX05 232 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ZBED8Q8IZ13 594 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 PELI3Q8N2H9 469 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 PPFIBP2Q8ND30 876 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 AGAP11Q8TF27 550 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 IP6K1Q92551 441 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SEPT8Q92599 483 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ABTB1Q969K4 478 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 EME1Q96AY2 570 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SH3KBP1Q96B97 665 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 MSI2Q96DH6 328 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 REXO5Q96IC2 774 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SERINC2Q96SA4 455 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SYT15Q9BQS2 421 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ISCA1Q9BUE6 129 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SF3B5Q9BWJ5 86 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 FTOQ9C0B1 505 aaKnown RBP eCLIP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 B3GNT4Q9C0J1 378 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 RBM38Q9H0Z9 239 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ACAD9Q9H845 621 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 C10orf88Q9H8K7 445 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 C9orf78Q9NZ63 289 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 DLGAP2Q9P1A6 1054 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 HMGXB4Q9UGU5 601 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 ANAPC5Q9UJX4 755 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 UTS2RQ9UKP6 389 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 SLC39A10Q9ULF5 831 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
ITGB1-219ENST00000534049 CICQ96RK0 1608 aaPredicted RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 MAP2P11137 1827 aaKnown RBP4.28□□□□□ -1.72
ITGB1-219ENST00000534049 C4BP0C0L5 1744 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 MRC1P22897 1456 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 LOC105369274A0A096LPK9 316 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 LOC102723532A0A0G2JNH3 316 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 C17orf113A0A1B0GUU1 675 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 ARHGAP10A1A4S6 786 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 MAGEB16A2A368 324 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 GOLGA8IPA6NC78 632 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 LRRC72A6NJI9 287 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 CCT8L1PA6NM43 557 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 MIF4GDA9UHW6 222 aaKnown RBP4.27□□□□□ -1.73
ITGB1-219ENST00000534049 FBP2O00757 339 aa4.27□□□□□ -1.73
ITGB1-219ENST00000534049 IFIT3O14879 490 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms