RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 COLEC12Q5KU26 742 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 KDELC1Q6UW63 502 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 FAM92BQ6ZTR7 304 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 TTC30BQ8N4P2 665 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 APOBEC4Q8WW27 367 aaKnown RBP16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 CXorf40BQ96DE9 158 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 ABHD17AQ96GS6 310 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 TEKT5Q96M29 485 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 SLC40A1Q9NP59 571 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 ABHD10Q9NUJ1 306 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 CROTQ9UKG9 612 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 DOPEY2Q9Y3R5 2298 aa16.78■□□□□ 0.28
RPUSD4-207ENST00000532800 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 NBASA2RRP1 2371 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 KIAA0754O94854 1291 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 NDUFA10O95299 355 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 TPM3P06753 285 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 FURINP09958 794 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 NFKB1P19838 968 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 IDSP22304 550 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 CDKN2BP42772 138 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 WNT3AP56704 352 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 MC1RQ01726 317 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 WASHC5Q12768 1159 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 TRIM14Q14142 442 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 IGFBP7Q16270 282 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 LRRC38Q5VT99 294 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 AGAP9Q5VTM2 703 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 CACHD1Q5VU97 1274 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 CCDC70Q6NSX1 233 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 IRGCQ6NXR0 463 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 C6orf15Q6UXA7 325 aaPredicted RBP16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 WASH2PQ6VEQ5 465 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 PRSS42Q7Z5A4 293 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 RASGRP3Q8IV61 690 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 RHOT2Q8IXI1 618 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 RHOT1Q8IXI2 618 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 GPR150Q8NGU9 434 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 NHEJ1Q9H9Q4 299 aaPredicted RBP16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 IL26Q9NPH9 171 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 WASH6PQ9NQA3 447 aa16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-207ENST00000532800 LOC285095A0A1B0GVY8 99 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 TOX3O15405 576 aaPredicted RBP16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 BUD23O43709 281 aaKnown RBP16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 NR1D1P20393 614 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 COMTP21964 271 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 HMGCLP35914 325 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 CASRP41180 1078 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 CTSCP53634 463 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 ADCY2Q08462 1091 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 GTF2H3Q13889 308 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 CRTC2Q53ET0 693 aaPredicted RBP16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 ODF2Q5BJF6 829 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 SIRPB2Q5JXA9 342 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 KAZNQ674X7 775 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 FAM151BQ6UXP7 276 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 SLC25A41Q8N5S1 370 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 TFB1MQ8WVM0 346 aaKnown RBP16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 KLHL6Q8WZ60 621 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 STAMBPL1Q96FJ0 436 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 DDX56Q9NY93 547 aaKnown RBP16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 FAM153AQ9UHL3 310 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 LNPEPQ9UIQ6 1025 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 ANAPC2Q9UJX6 822 aa16.76■□□□□ 0.27
RPUSD4-207ENST00000532800 SPOPO43791 374 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A9O60656 530 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 CST8O60676 142 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 MFAP3LO75121 409 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 SPAG6O75602 509 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 TIAF1O95411 115 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 VCLP18206 1134 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A6P19224 532 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A1P22309 533 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A4P22310 534 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 SPAM1P38567 509 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 FOXK1P85037 733 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 ERV3-1Q14264 604 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 IL11RAQ14626 422 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 CHRNA6Q15825 494 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 TAZQ16635 292 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 LACTB2Q53H82 288 aaPredicted RBP16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 FAM83HQ6ZRV2 1179 aaPredicted RBP16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 TMEM135Q86UB9 458 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 RBM12BQ8IXT5 1001 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 RASGEF1AQ8N9B8 481 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 HAUS1Q96CS2 278 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 OXNAD1Q96HP4 312 aaPredicted RBP16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 MRGPRX2Q96LB1 330 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 CCDC42Q96M95 316 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 SRPK1Q96SB4 655 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 GOLPH3Q9H4A6 298 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A7Q9HAW7 530 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A10Q9HAW8 530 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 UGT1A8Q9HAW9 530 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 IL17CQ9P0M4 197 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 EPHA6Q9UF33 1036 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 PSMD13Q9UNM6 376 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 TP53TG5Q9Y2B4 290 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms