RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 ZFC3H1O60293 1989 aaKnown RBP19.55■□□□□ 0.72
CPSF1-209ENST00000532725 A0A1W2PQM1 296 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 CCDC188H7C350 402 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 NTN3O00634 580 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-209ENST00000532725 B4GAT1O43505 415 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 MLNP12872 115 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 F3P13726 295 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 ATP1B2P14415 290 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-209ENST00000532725 IVDP26440 423 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 FOXN2P32314 431 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 CCL7P80098 99 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 PTK6Q13882 451 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 NR1D2Q14995 579 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 FNBP1LQ5T0N5 605 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 DET1Q7L5Y6 550 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 AMZ2Q86W34 360 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 BEND7Q8N7W2 519 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-209ENST00000532725 Q8N9G6 341 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-209ENST00000532725 SLC37A2Q8TED4 501 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 GATA6Q92908 595 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 DCUN1D1Q96GG9 259 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 SYBUQ9NX95 663 aa19.54■□□□□ 0.72
CPSF1-209ENST00000532725 SCHIP1Q9P0W5 487 aaPredicted RBP19.54■□□□□ 0.72
CPSF1-209ENST00000532725 ACACBO00763 2458 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 OR5K4A6NMS3 321 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 GOT2P00505 430 aaKnown RBP19.53■□□□□ 0.72
CPSF1-209ENST00000532725 RALBP11234 206 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 NMBRP28336 390 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 FASLGP48023 281 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 DMPKQ09013 629 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 DBN1Q16643 649 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 BCL7AQ4VC05 210 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-209ENST00000532725 RNASEH2BQ5TBB1 312 aaKnown RBP19.53■□□□□ 0.72
CPSF1-209ENST00000532725 ABRAXAS1Q6UWZ7 409 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 WASH2PQ6VEQ5 465 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 PPIL6Q8IXY8 311 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 OR4L1Q8NH43 312 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 WDR48Q8TAF3 677 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 LINC00615Q96LM1 132 aaPredicted RBP19.53■□□□□ 0.72
CPSF1-209ENST00000532725 RUNDC3BQ96NL0 473 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 LRRN3Q9H3W5 708 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 OSGEPL1Q9H4B0 414 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 MRM3Q9HC36 420 aaKnown RBP19.53■□□□□ 0.72
CPSF1-209ENST00000532725 WASH6PQ9NQA3 447 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 UNC13CQ8NB66 2214 aa19.53■□□□□ 0.72
CPSF1-209ENST00000532725 KIR2DS5A0A0G2JLQ3 304 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 A0A0G2JNG1 304 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 MGAT4DA6NG13 374 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 RHPN2P1A8MT19 583 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 CFAP99D6REC4 459 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 KIR2DS3K7RE56 304 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 TCEA3O75764 348 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 BRAFP15056 766 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 VCLP18206 1134 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 XRCC1P18887 633 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-209ENST00000532725 IDSP22304 550 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 GPR3P46089 330 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 KIR2DS5Q14953 304 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 AGAP9Q5VTM2 703 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 ARMC3Q5W041 872 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 METRNLQ641Q3 311 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 AFTPHQ6ULP2 937 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 FAM83HQ6ZRV2 1179 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-209ENST00000532725 SYDE1Q6ZW31 735 aaPredicted RBP19.52■□□□□ 0.72
CPSF1-209ENST00000532725 SPRED1Q7Z699 444 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 CCNJLQ8IV13 435 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 OR6P1Q8NGX9 317 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 SERPINB12Q96P63 405 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 XAB2Q9HCS7 855 aaKnown RBP19.52■□□□□ 0.72
CPSF1-209ENST00000532725 SARS2Q9NP81 518 aaKnown RBP19.52■□□□□ 0.72
CPSF1-209ENST00000532725 SOX13Q9UN79 622 aa19.52■□□□□ 0.72
CPSF1-209ENST00000532725 MAGEB16A2A368 324 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 SDR42E2A6NKP2 422 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 GOLGA8MH3BSY2 632 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 DNALI1O14645 258 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-209ENST00000532725 RPLP0P05388 317 aaKnown RBP19.51■□□□□ 0.71
CPSF1-209ENST00000532725 SLC2A4P14672 509 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 RPL10P27635 214 aaKnown RBP19.51■□□□□ 0.71
CPSF1-209ENST00000532725 MAGEA3P43357 314 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 PRLHRP49683 370 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 OR1D5P58170 312 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 PRAMEP78395 509 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 DR1Q01658 176 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 ITIH4Q14624 930 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 XKR5Q6UX68 686 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 MPP5Q8N3R9 675 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 OR2L2Q8NH16 312 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 MFSD3Q96ES6 412 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 ZNF624Q9P2J8 865 aaPredicted RBP19.51■□□□□ 0.71
CPSF1-209ENST00000532725 ASIC3Q9UHC3 531 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 WDR37Q9Y2I8 494 aa19.51■□□□□ 0.71
CPSF1-209ENST00000532725 KLHL33A6NCF5 533 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 TRABD2BA6NFA1 517 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 C1QTNF9BB2RNN3 333 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 C1QTNF9P0C862 333 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 ALDH4A1P30038 563 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 SLC19A1P41440 591 aa19.5■□□□□ 0.71
CPSF1-209ENST00000532725 DRG2P55039 364 aaKnown RBP19.5■□□□□ 0.71
CPSF1-209ENST00000532725 UBE2IP63279 158 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms