RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SPIDRQ14159 915 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MFSD4BQ5TF39 518 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CYS1Q717R9 158 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 OTOP2Q7RTS6 562 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 LRTOMTQ8WZ04 291 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 PPCDCQ96CD2 204 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CENPNQ96H22 339 aaPredicted RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 SUV39H1O43463 412 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CNTN5O94779 1100 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MED26O95402 600 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ALDOAP04075 364 aaKnown RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 GSNP06396 782 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 C8AP07357 584 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 ATP1A4Q13733 1029 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 EPGNQ6UW88 154 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CHPFQ8IZ52 775 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 PHTF2Q8N3S3 785 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 WDR60Q8WVS4 1066 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 HMG20AQ9NP66 347 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 U3KQV3 271 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 DYRK3O43781 588 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 CCNFP41002 786 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 TMPRSS11BQ86T26 416 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 OR7A2PQ8NGA2 310 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 PHF10Q8WUB8 498 aaKnown RBP15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 SKA1Q96BD8 255 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 TMEM248Q9NWD8 314 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 MKS1Q9NXB0 559 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 RPS6KB2Q9UBS0 482 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 DMTF1Q9Y222 760 aa15.16■□□□□ 0.02
PCDHA3-202ENST00000532566 OR2AG2A6NM03 316 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 TMEM233B4DJY2 109 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 KERAO60938 352 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 MT-ND1P03886 318 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 EDN1P05305 212 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 CSKP41240 450 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ASMTP46597 345 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SERINC3Q13530 473 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 TIMM50Q3ZCQ8 353 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 C6orf62Q9GZU0 229 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 EBF2Q9HAK2 575 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 KRT87PA6NCN2 255 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 IQCF5A8MTL0 148 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 PCSK2P16519 638 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SLC6A2P23975 617 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 CCND3P30281 292 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SLC26A3P40879 764 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ADARP55265 1226 aaKnown RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 USP46P62068 366 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 PITRM1Q5JRX3 1037 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 EIF3MQ7L2H7 374 aaKnown RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SNX20Q7Z614 316 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 PLD6Q8N2A8 252 aaKnown RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ZNF540Q8NDQ6 660 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SMPD3Q9NY59 655 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 NKX1-2Q9UD57 310 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 IKZF3Q9UKT9 509 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 MTMR11A4FU01 709 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 PAPSS2O95340 614 aaPredicted RBP15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 CLTBP09497 229 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ERVK-8P63133 956 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 SCAPQ12770 1279 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 CHIT1Q13231 466 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 GPR33Q49SQ1 333 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ZNF697Q5TEC3 545 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 GPR107Q5VW38 600 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 CES5AQ6NT32 575 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 USP7Q93009 1102 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 EPB41L4BQ9H329 900 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 EBF3Q9H4W6 596 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
PCDHA3-202ENST00000532566 LINC00854A0A1B0GVQ3 168 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MATN2O00339 956 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 TRIM24O15164 1050 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 PRKCGP05129 697 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 PRPS2P11908 318 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 XRCC1P18887 633 aaPredicted RBP15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MYL12AP19105 171 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 ELP6Q0PNE2 266 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 TRAF3Q13114 568 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 ARMCX4Q5H9R4 360 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 ERICH5Q6P6B1 374 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 BHLHB9Q6PI77 547 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 C14orf80Q86SX3 495 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 C17orf64Q86WR6 236 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 TMEM40Q8WWA1 233 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 HEPHQ9BQS7 1158 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 TMEM175Q9BSA9 504 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MRM3Q9HC36 420 aaKnown RBP15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 DAPK2Q9UIK4 370 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MYH7BA7E2Y1 1941 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MYL12BO14950 172 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 PER2O15055 1255 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 CYP7B1O75881 506 aa15.14■□□□□ 0.01
PCDHA3-202ENST00000532566 MTHFRP42898 656 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms