RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TP73O15350 636 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 KCNJ13O60928 360 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 GAS8O95995 478 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 MLNP12872 115 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 F3P13726 295 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 ACRV1P26436 265 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 NMBRP28336 390 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 PDX1P52945 283 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 TERF1P54274 439 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 CCL7P80098 99 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 SEMA3AQ14563 771 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 DBN1Q16643 649 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 BCL7AQ4VC05 210 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 RNASEH2BQ5TBB1 312 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 NLRP9Q7RTR0 991 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 SPRED1Q7Z699 444 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 TRAPPC5Q8IUR0 188 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 MPP5Q8N3R9 675 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 MAPK15Q8TD08 544 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 BFARQ9NZS9 450 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 ZNF624Q9P2J8 865 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 CRLS1Q9UJA2 301 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 CLCA2Q9UQC9 943 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 WDR37Q9Y2I8 494 aa13.71□□□□□ -0.21
TSPAN4-220ENST00000532375 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 C1QTNF9BB2RNN3 333 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 CCDC188H7C350 402 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 AP3B1O00203 1094 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 C1QTNF9P0C862 333 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 ATP1B2P14415 290 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 JUPP14923 745 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 MSH3P20585 1137 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SLC19A1P41440 591 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 CFHR1Q03591 330 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SQSTM1Q13501 440 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 LAMB3Q13751 1172 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 INSCQ1MX18 579 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 ZRANB3Q5FWF4 1079 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 FNBP1LQ5T0N5 605 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 AGAP9Q5VTM2 703 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 DET1Q7L5Y6 550 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 TMPRSS9Q7Z410 1059 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 AMZ2Q86W34 360 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 KLHL7Q8IXQ5 586 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 MFSD3Q96ES6 412 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 ZNF514Q96K75 400 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SERPINB12Q96P63 405 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 COPS8Q99627 209 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 TRIM56Q9BRZ2 755 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 ZCCHC2Q9C0B9 1178 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 LRRN3Q9H3W5 708 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SARS2Q9NP81 518 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 MARCH4Q9P2E8 410 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 PRSS21Q9Y6M0 314 aa13.7□□□□□ -0.22
TSPAN4-220ENST00000532375 PRAMEF33A0A0G2JMD5 474 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 TRABD2BA6NFA1 517 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 SNX2O60749 519 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CD1CP29017 333 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CASQ1P31415 396 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 AKT1P31749 480 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 GPR3P46089 330 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 ARCN1P48444 511 aaKnown RBP13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 PRLHRP49683 370 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 OR1D5P58170 312 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 GTF2H3Q13889 308 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 NFE2L1Q14494 772 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 ITIH4Q14624 930 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CLCA4Q14CN2 919 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 ISXQ2M1V0 245 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 ARMC3Q5W041 872 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CES3Q6UWW8 571 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 JAMLQ86YT9 394 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 PPIL6Q8IXY8 311 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 LILRA3Q8N6C8 439 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 CLDN19Q8N6F1 224 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 SPATA4Q8NEY3 305 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 OR2L2Q8NH16 312 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 OR4L1Q8NH43 312 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 HEXDCQ8WVB3 486 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 FCRL3Q96P31 734 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 ENTPD2Q9Y5L3 495 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 WDFY3Q8IZQ1 3526 aa13.69□□□□□ -0.22
TSPAN4-220ENST00000532375 MAP1BP46821 2468 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-220ENST00000532375 KIR2DS5A0A0G2JLQ3 304 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1319.9 ms