RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ATXN10Q9UBB4 475 aa10.24□□□□□ -0.77
COPB1-207ENST00000529866 RPL26L1Q9UNX3 145 aaKnown RBP10.24□□□□□ -0.77
COPB1-207ENST00000529866 B3GNT3Q9Y2A9 372 aa10.24□□□□□ -0.77
COPB1-207ENST00000529866 DNAJC16Q9Y2G8 782 aa10.24□□□□□ -0.77
COPB1-207ENST00000529866 IGHV5-51A0A0C4DH38 117 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 LRRC53A6NM62 1247 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 KMOO15229 486 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 SLC25A14O95258 325 aaPredicted RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 CLDN7O95471 211 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 RAB40ALP0C0E4 278 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 VCLP18206 1134 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 CES1P23141 567 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 GRNP28799 593 aaKnown RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 MIPP30301 263 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 HALP42357 657 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 SPINT3P49223 89 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 TUBB4BP68371 445 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 TUBB2AQ13885 445 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 KCNAB1Q14722 419 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 PLA2G4EQ3MJ16 856 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ANKRD20A8PQ5CZ79 823 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ACAD10Q6JQN1 1059 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 WASH2PQ6VEQ5 465 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ZC3H18Q86VM9 953 aaKnown RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 LRRC49Q8IUZ0 686 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 CISD2Q8N5K1 135 aaKnown RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 ENDOVQ8N8Q3 282 aaKnown RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 LPCAT1Q8NF37 534 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ADAMTS17Q8TE56 1095 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 SGSM3Q96HU1 749 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 LRFN5Q96NI6 719 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 SMIM14Q96QK8 99 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 CD180Q99467 661 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 MLPHQ9BV36 600 aaPredicted RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 TDRD1Q9BXT4 1180 aaKnown RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 AKIRIN1Q9H9L7 192 aaPredicted RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 FANCEQ9HB96 536 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 AGPAT4Q9NRZ5 378 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ZNF624Q9P2J8 865 aaPredicted RBP10.23□□□□□ -0.77
COPB1-207ENST00000529866 APCP25054 2843 aa10.23□□□□□ -0.77
COPB1-207ENST00000529866 ZNF106Q9H2Y7 1883 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 UBA6A0AVT1 1052 aaPredicted RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 HEATR9A2RTY3 570 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 TLCD2A6NGC4 264 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 OR52A4PA6NMU1 304 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 DDX3XO00571 662 aaKnown RBP eCLIP10.22□□□□□ -0.775e-24■■■■□ 22.8
COPB1-207ENST00000529866 CCDC172P0C7W6 258 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 EBLN1P0CF75 366 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 FERP16591 822 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 ZNF7P17097 686 aaPredicted RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 CDK11BP21127 795 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 IDSP22304 550 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 RPL10P27635 214 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 HSD11B2P80365 405 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 GPS2Q13227 327 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 DPYSL2Q16555 572 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 KYNUQ16719 465 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 DNTTIP2Q5QJE6 756 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 TMTC4Q5T4D3 741 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 AGAP9Q5VTM2 703 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 ABRAXAS1Q6UWZ7 409 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 ZNF517Q6ZMY9 492 aaPredicted RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 ZNF571Q7Z3V5 609 aaPredicted RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 RAB43Q86YS6 212 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 TEX26Q8N6G2 289 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 NAP1L5Q96NT1 182 aaPredicted RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 WDR24Q96S15 920 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 ZSCAN5AQ9BUG6 496 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 SPATA16Q9BXB7 569 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 NLNQ9BYT8 704 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 CHST8Q9H2A9 424 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 PCDH9Q9HC56 1237 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 TCFL5Q9UL49 500 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 CHKBQ9Y259 395 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 TTLL3Q9Y4R7 772 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 COPG1Q9Y678 874 aaKnown RBP10.22□□□□□ -0.77
COPB1-207ENST00000529866 ADGRG4Q8IZF6 3080 aa10.22□□□□□ -0.77
COPB1-207ENST00000529866 MEN1O00255 615 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 CHUKO15111 745 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 VEGFDO43915 354 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 IPO13O94829 963 aaKnown RBP10.21□□□□□ -0.77
COPB1-207ENST00000529866 MBD3O95983 291 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 PRF1P14222 555 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 BRAFP15056 766 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 TCF4P15884 667 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 FECHP22830 423 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 AMPD1P23109 780 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 RAPSNQ13702 412 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 PLCL1Q15111 1095 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 PLEKHN1Q494U1 663 aaPredicted RBP10.21□□□□□ -0.77
COPB1-207ENST00000529866 ALS2CLQ60I27 953 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 PDPK2PQ6A1A2 396 aa10.21□□□□□ -0.77
COPB1-207ENST00000529866 ALG1LQ6GMV1 187 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms