RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 HNRNPA1P09651 372 aaKnown RBP eCLIP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 IL7RP16871 459 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ANXA7P20073 488 aaKnown RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 SHC1P29353 583 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 MMP15P51511 669 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 KCNJ10P78508 379 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 DCTN2Q13561 401 aaKnown RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ZNF805Q5CZA5 627 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ALS2CLQ60I27 953 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 TRIM65Q6PJ69 517 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ERC1Q8IUD2 1116 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 SLC5A8Q8N695 610 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 GCSAMQ8N6F7 178 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 GIMAP5Q96F15 307 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ZNF414Q96IQ9 312 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 FOXN4Q96NZ1 517 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 ZNF300Q96RE9 604 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 NR1H4Q96RI1 486 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 RHNO1Q9BSD3 238 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 FGFBP2Q9BYJ0 223 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 YIPF1Q9Y548 306 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 A0A087WW49 117 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 C15orf62A8K5M9 175 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PLK4O00444 970 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PIP5K1CO60331 668 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 AP2A2O94973 939 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 CSPG5O95196 566 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 MOCS3O95396 460 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 FRMD6-AS1P0C7T7 363 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 SNX16P57768 344 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 NEXNQ0ZGT2 675 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 CDC16Q13042 620 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 RIGQ13278 110 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PDE1CQ14123 709 aaPredicted RBP3.51□□□□□ -1.85
CSDE1-210ENST00000525878 GTDC1Q4AE62 458 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 XKR6Q5GH73 641 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 ISCA2Q86U28 154 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PTOV1Q86YD1 416 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PLD3Q8IV08 490 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 ANKRD18AQ8IVF6 992 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 PAF1Q8N7H5 531 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 SMPDL3BQ92485 455 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 SMC6Q96SB8 1091 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 RANBP17Q9H2T7 1088 aaKnown RBP3.51□□□□□ -1.85
CSDE1-210ENST00000525878 FAM120CQ9NX05 1096 aaKnown RBP3.51□□□□□ -1.85
CSDE1-210ENST00000525878 COQ3Q9NZJ6 369 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 ZHX2Q9Y6X8 837 aa3.51□□□□□ -1.85
CSDE1-210ENST00000525878 KDM3AQ9Y4C1 1321 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 A0A1W2PRG0 241 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 PI15O43692 258 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 NKX2-2O95096 273 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 KCNK5O95279 499 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 F9P00740 461 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 NGFP01138 241 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 HMBSP08397 361 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 KRT19P08727 400 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 SELLP14151 372 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 NFKBIAP25963 317 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 EIF3BP55884 814 aaKnown RBP3.5□□□□□ -1.85
CSDE1-210ENST00000525878 PNLIPRP3Q17RR3 467 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 SOWAHCQ53LP3 525 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-210ENST00000525878 NDUFAF5Q5TEU4 345 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 ZNF843Q8N446 348 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 EMC1Q8N766 993 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 NFKBIDQ8NI38 313 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 HM13Q8TCT9 377 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 SAAL1Q96ER3 474 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 SEMA3CQ99985 751 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 STRA6Q9BX79 667 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 TMEM39BQ9GZU3 492 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 MKLN1Q9UL63 735 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 MAU2Q9Y6X3 613 aa3.5□□□□□ -1.85
CSDE1-210ENST00000525878 IGLV7-46A0A075B6I9 117 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 IGHV4-61A0A0C4DH41 118 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 KANSL1LA0AUZ9 987 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 GPR137BO60478 399 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 BMP10O95393 424 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 IGHV4-59P01825 116 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 RAF1P04049 648 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 EDN1P05305 212 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 ICAM1P05362 532 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 SLC6A12P48065 614 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 SNRPD1P62314 119 aaKnown RBP3.49□□□□□ -1.85
CSDE1-210ENST00000525878 MFAP5Q13361 173 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 ENPP2Q13822 863 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 ZNF774Q6NX45 483 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 INO80CQ6PI98 192 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-210ENST00000525878 DOK6Q6PKX4 331 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 TSSK4Q6SA08 328 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 CDC20BQ86Y33 519 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 C1orf52Q8N6N3 182 aaKnown RBP3.49□□□□□ -1.85
CSDE1-210ENST00000525878 PPP4R1Q8TF05 950 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 MMABQ96EY8 250 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-210ENST00000525878 EGLN2Q96KS0 407 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 AGAP3Q96P47 875 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 LAT2Q9GZY6 243 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 PIGMQ9H3S5 423 aa3.49□□□□□ -1.85
CSDE1-210ENST00000525878 PELI2Q9HAT8 420 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms