RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PLD5Q8N7P1 536 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 PSMG3-AS1Q96PY0 264 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 TMPRSS11EQ9UL52 423 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 PCDHGA6Q9Y5G7 932 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 DNAJB5O75953 348 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 NELFEP18615 380 aaKnown RBP23.51■■□□□ 1.35
USP47-205ENST00000525257 PBX1P40424 430 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 CDK18Q07002 472 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 WASH2PQ6VEQ5 465 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 BPIFA1Q9NP55 256 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 LHX9Q9NQ69 397 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 WASH6PQ9NQA3 447 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 UVRAGQ9P2Y5 699 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 EPHA6Q9UF33 1036 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 WDR37Q9Y2I8 494 aa23.51■■□□□ 1.35
USP47-205ENST00000525257 SPTBN1Q01082 2364 aaKnown RBP23.51■■□□□ 1.35
USP47-205ENST00000525257 LRRD1A4D1F6 860 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 AURKAO14965 403 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 MT-ND3P03897 115 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 PDGFAP04085 211 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 ANP32AP39687 249 aaKnown RBP23.5■■□□□ 1.35
USP47-205ENST00000525257 TUBB3Q13509 450 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 KCNAB1Q14722 419 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 C11orf96Q7Z7L8 435 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 SPATA22Q8NHS9 363 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 GDAP1Q8TB36 358 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.5■■□□□ 1.35
USP47-205ENST00000525257 RUFY1Q96T51 708 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 PACSIN1Q9BY11 444 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 SLC25A51Q9H1U9 297 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 ACTL8Q9H568 366 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 CBX8Q9HC52 389 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 PDE7BQ9NP56 450 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 CAPN11Q9UMQ6 739 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 NENFQ9UMX5 172 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 SPO11Q9Y5K1 396 aa23.5■■□□□ 1.35
USP47-205ENST00000525257 TNRC6AQ8NDV7 1962 aaKnown RBP23.5■■□□□ 1.35
USP47-205ENST00000525257 IGHV5-51A0A0C4DH38 117 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 MT-CYBP00156 380 aaPredicted RBP23.49■■□□□ 1.35
USP47-205ENST00000525257 VCLP18206 1134 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 FANCCQ00597 558 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 GTF2H3Q13889 308 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 ATP13A5Q4VNC0 1218 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 PWWP2BQ6NUJ5 590 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 CYB5D1Q6P9G0 228 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 NPNTQ6UXI9 565 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 B4GALNT4Q76KP1 1039 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 SIDT2Q8NBJ9 832 aaKnown RBP23.49■■□□□ 1.35
USP47-205ENST00000525257 GPR150Q8NGU9 434 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 CTNNBL1Q8WYA6 563 aaPredicted RBP23.49■■□□□ 1.35
USP47-205ENST00000525257 VPS35Q96QK1 796 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 TRIM55Q9BYV6 548 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 RAB33BQ9H082 229 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 RARRES3Q9UL19 164 aa23.49■■□□□ 1.35
USP47-205ENST00000525257 RP1L1Q8IWN7 2480 aaPredicted RBP23.48■■□□□ 1.35
USP47-205ENST00000525257 C21orf140B9A014 251 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 H2AFZP0C0S5 128 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 FOLR1P15328 257 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 HALP42357 657 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 UQCRFS1P47985 274 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 TMEM115Q12893 351 aaPredicted RBP23.48■■□□□ 1.35
USP47-205ENST00000525257 SLC9A4Q6AI14 798 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 CCDC70Q6NSX1 233 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 H2AFVQ71UI9 128 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 TADA1Q96BN2 335 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 AKIRIN1Q9H9L7 192 aaPredicted RBP23.48■■□□□ 1.35
USP47-205ENST00000525257 LRRC4CQ9HCJ2 640 aa23.48■■□□□ 1.35
USP47-205ENST00000525257 LUC7L2Q9Y383 392 aaKnown RBP23.48■■□□□ 1.35
USP47-205ENST00000525257 APOL1O14791 398 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 PMPCBO75439 489 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 NDST3O95803 873 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 RECKO95980 971 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 FECHP22830 423 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 RPS18P62269 152 aaKnown RBP23.47■■□□□ 1.35
USP47-205ENST00000525257 SEMA5AQ13591 1074 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 MESDQ14696 234 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 PDK1Q15118 436 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 FAM199XQ6PEV8 388 aaPredicted RBP23.47■■□□□ 1.35
USP47-205ENST00000525257 APLFQ8IW19 511 aaPredicted RBP23.47■■□□□ 1.35
USP47-205ENST00000525257 UBXN4Q92575 508 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 SLC41A2Q96JW4 573 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 TTC25Q96NG3 672 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 OLFM3Q96PB7 478 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 UBP1Q9NZI7 540 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 PSMD13Q9UNM6 376 aa23.47■■□□□ 1.35
USP47-205ENST00000525257 PPP1R12AO14974 1030 aaPredicted RBP23.46■■□□□ 1.35
USP47-205ENST00000525257 GYPCP04921 128 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 EBLN1P0CF75 366 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 UBASH3AP57075 661 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 C4orf17Q53FE4 359 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 CPZQ66K79 652 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 CAVIN1Q6NZI2 390 aaKnown RBP23.46■■□□□ 1.35
USP47-205ENST00000525257 CERS6Q6ZMG9 384 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 MAP3K3Q99759 626 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 GLOD4Q9HC38 313 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 SEMA5BQ9P283 1151 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 LCMT1Q9UIC8 334 aa23.46■■□□□ 1.35
USP47-205ENST00000525257 C3orf70A6NLC5 250 aaPredicted RBP23.45■■□□□ 1.34
USP47-205ENST00000525257 TTLL8A6PVC2 850 aa23.45■■□□□ 1.34
USP47-205ENST00000525257 VPS4BO75351 444 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms