RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 ERN2Q76MJ5 926 aaKnown RBP4.33□□□□□ -1.72
PCM1-223ENST00000524356 SLC46A3Q7Z3Q1 461 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 TICAM1Q8IUC6 712 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 MMP21Q8N119 569 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 METTL25Q8N6Q8 603 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 RTL3Q8N8U3 475 aaKnown RBP4.33□□□□□ -1.72
PCM1-223ENST00000524356 PSD4Q8NDX1 1056 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 SHC3Q92529 594 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 CNDP1Q96KN2 507 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 CFAP57Q96MR6 1250 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 INTS14Q96SY0 518 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 MAP7D2Q96T17 732 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 GAD1Q99259 594 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 SLC25A23Q9BV35 468 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 MLPHQ9BV36 600 aaPredicted RBP4.33□□□□□ -1.72
PCM1-223ENST00000524356 CACNG6Q9BXT2 260 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 SLC5A7Q9GZV3 580 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 HSD3B7Q9H2F3 369 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 SMOC2Q9H3U7 446 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 PANK3Q9H999 370 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 PDE11AQ9HCR9 933 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 ABCB8Q9NUT2 735 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 MIS18AQ9NYP9 233 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 CNIH4Q9P003 139 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 IL19Q9UHD0 177 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 PCDHB2Q9Y5E7 798 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 SNX14Q9Y5W7 946 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 NFS1Q9Y697 457 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 LAMA3Q16787 3333 aa4.33□□□□□ -1.72
PCM1-223ENST00000524356 UBN2Q6ZU65 1347 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3DA0A087WVF3 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3IA0A087WXS9 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3EA0A087X179 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3KA0A087X1G2 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 LOC102723996A0A087X1L8 192 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 RNF103-CHMP3A0A140T963 221 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3BA6NDS4 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3FA6NER0 549 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 ERICH4A6NGS2 130 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 FAM25EA8MYX2 175 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3LB9A6J9 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 BOLA2-SMG1P6H3BVE0 249 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 RNF103O00237 685 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 NKX2-8O15522 239 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 KLHL41O60662 606 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TACC1O75410 805 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 PALMO75781 387 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 WDR47O94967 919 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 REC8O95072 547 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 KLKB1P03952 638 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3HP0C7X1 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ARSAP15289 507 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 CCNA2P20248 432 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 IL4RP24394 825 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 UQCRC1P31930 480 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 CCR3P51677 355 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 BMXP51813 675 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 FOXL2P58012 376 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TAS2R50P59544 299 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 HILS1P60008 231 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TIAL1Q01085 375 aaKnown RBP eCLIP4.32□□□□□ -1.72
PCM1-223ENST00000524356 CDK18Q07002 472 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 LMAN2Q12907 356 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 NPRL3Q12980 569 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ANKRD20A4Q4UJ75 823 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ANKRD20A8PQ5CZ79 823 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ANKRD20A2Q5SQ80 823 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 CERCAMQ5T4B2 595 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ANKRD20A1Q5TYW2 823 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ANKRD20A3Q5VUR7 823 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 FAM90A2PQ658T7 463 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3GQ6DHY5 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 JADE1Q6IE81 842 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3CQ6IPX1 549 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TRIM72Q6ZMU5 477 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 GBP6Q6ZN66 633 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 OTUD6AQ7L8S5 288 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 RRM2BQ7LG56 351 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TMEM110Q86TL2 294 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 AACSQ86V21 672 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 HOOK3Q86VS8 718 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 TBC1D3Q8IZP1 549 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 C11orf44Q8N8P7 122 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 MRPL43Q8N983 215 aaKnown RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 TC2NQ8N9U0 490 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 KDM1BQ8NB78 822 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 MAFAQ8NHW3 353 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 BRSK1Q8TDC3 778 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ZKSCAN4Q969J2 545 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 MMABQ96EY8 250 aaPredicted RBP4.32□□□□□ -1.72
PCM1-223ENST00000524356 CDCA5Q96FF9 252 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 ELMOD3Q96FG2 381 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 VPS50Q96JG6 964 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 NEK1Q96PY6 1258 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 MGME1Q9BQP7 344 aa4.32□□□□□ -1.72
PCM1-223ENST00000524356 NT5C3AQ9H0P0 336 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms