RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 GALNT3Q14435 633 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 IHHQ14623 411 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 LLGL1Q15334 1064 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 PTCHD3Q3KNS1 767 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 HENMT1Q5T8I9 393 aaKnown RBP11.4□□□□□ -0.58
SDCBP-211ENST00000523441 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 ACAD10Q6JQN1 1059 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 LRRTM4Q86VH4 590 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 ZBTB2Q8N680 514 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 GPR150Q8NGU9 434 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 CCHCR1Q8TD31 782 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 TLR10Q9BXR5 811 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 SLC7A5P2Q9GIP4 190 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 POLR1EQ9GZS1 481 aaKnown RBP11.4□□□□□ -0.58
SDCBP-211ENST00000523441 PCDH9Q9HC56 1237 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 MYO1AQ9UBC5 1043 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 FAM8A1Q9UBU6 413 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 SHOC2Q9UQ13 582 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 B3GNT3Q9Y2A9 372 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 WDR37Q9Y2I8 494 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 PPIL1Q9Y3C6 166 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
SDCBP-211ENST00000523441 ADGRG4Q8IZF6 3080 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 SSU72P8A0A1W2PR75 194 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 KMOO15229 486 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 LDB2O43679 373 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 LPOP22079 712 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 IDSP22304 550 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 PBLDP30039 288 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 CA5AP35218 305 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 RRADP55042 308 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 CDH6P55285 790 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 MAMLD1Q13495 774 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 LAMB3Q13751 1172 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 ANKRD20A8PQ5CZ79 823 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 FKBP15Q5T1M5 1219 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 ZNF517Q6ZMY9 492 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 FJX1Q86VR8 437 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 NLRP8Q86W28 1048 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 TRAPPC5Q8IUR0 188 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 SLC34A3Q8N130 599 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 NEK11Q8NG66 645 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 GDAP1Q8TB36 358 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 ADAMTS17Q8TE56 1095 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 UBXN4Q92575 508 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 INPP5DQ92835 1189 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 PPM1MQ96MI6 270 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 TDRD1Q9BXT4 1180 aaKnown RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 CLSTN2Q9H4D0 955 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 UCK1Q9HA47 277 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 KCND1Q9NSA2 647 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 POT1Q9NUX5 634 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
SDCBP-211ENST00000523441 CFAP20Q9Y6A4 193 aaKnown RBP11.39□□□□□ -0.59
SDCBP-211ENST00000523441 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 GJC1P36383 396 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 HALP42357 657 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 PER3P56645 1201 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 ZXDCQ2QGD7 858 aaPredicted RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 RALGPS1Q5JS13 557 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 TMEM102Q8N9M5 508 aaPredicted RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 GPR26Q8NDV2 337 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 SLC41A2Q96JW4 573 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 CSPG4P5Q96PW8 444 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 ZBTB20Q9HC78 741 aaPredicted RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 TRIM39Q9HCM9 518 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 IMP3Q9NV31 184 aaKnown RBP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 RBM22Q9NW64 420 aaKnown RBP eCLIP11.38□□□□□ -0.59
SDCBP-211ENST00000523441 ENTPD4Q9Y227 616 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
SDCBP-211ENST00000523441 SVILO95425 2214 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 MEN1O00255 615 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 CDK14O94921 469 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 PRLP01236 227 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 JCHAINP01591 159 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TPM2P07951 284 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 IL1R2P27930 398 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 CD86P42081 329 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 SSR1P43307 286 aaKnown RBP11.37□□□□□ -0.59
SDCBP-211ENST00000523441 HCAR3P49019 387 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 FOXL2P58012 376 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TUBB4BP68371 445 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 HSD11B2P80365 405 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 NIPAL4Q0D2K0 466 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ABRQ12979 859 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 MMRN1Q13201 1228 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 TUBB2AQ13885 445 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 KRT81Q14533 505 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 KRT31Q15323 416 aa11.37□□□□□ -0.59
SDCBP-211ENST00000523441 ZRSR2Q15696 482 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms