RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ITIH4Q14624 930 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 SHBQ15464 509 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 TCEA2Q15560 299 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 MARK2Q7KZI7 788 aaKnown RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 ADGRG6Q86SQ4 1221 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 PIP4P1Q86T03 277 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 SLC26A11Q86WA9 606 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 DCP2Q8IU60 420 aaKnown RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 OXR1Q8N573 874 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 EID2Q8N6I1 236 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 FAM174AQ8TBP5 190 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 NAT14Q8WUY8 206 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 SCG3Q8WXD2 468 aaKnown RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 LPGAT1Q92604 370 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 MRRFQ96E11 262 aaKnown RBP11.78□□□□□ -0.52
PVT1-215ENST00000522963 TCF12Q99081 682 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 TTC1Q99614 292 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 COPS8Q99627 209 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 ERVMER34-1Q9H9K5 563 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 GPR27Q9NS67 375 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 VPS18Q9P253 973 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 MOSPD1Q9UJG1 213 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 TMEM98Q9Y2Y6 226 aa11.78□□□□□ -0.52
PVT1-215ENST00000522963 ARID1BQ8NFD5 2236 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 SPTY2D1-AS1A0A0U1RR47 76 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 TMEM202A6NGA9 273 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 CACNB4O00305 520 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 TOR1BO14657 336 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 YKT6O15498 198 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 FFAR2O15552 330 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 FLRT2O43155 660 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 FAM155BO75949 473 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 NUDT17P0C025 328 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 MSH3P20585 1137 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 AKT1P31749 480 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PPARGP37231 505 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 ABCG1P45844 678 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 POLD2P49005 469 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 SIM1P81133 766 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 TMEM115Q12893 351 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 NAB1Q13506 487 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PTK2BQ14289 1009 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 NFATC4Q14934 902 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 KLHL38Q2WGJ6 581 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 INAVAQ3KP66 663 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 RNF187Q5TA31 235 aaPredicted RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 KCTD16Q68DU8 428 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 CNSTQ6PJW8 725 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 DOK6Q6PKX4 331 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 ENPP7Q6UWV6 458 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 STRA8Q7Z7C7 330 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 GALNT7Q86SF2 657 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PARGQ86W56 976 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 LRRC6Q86X45 466 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 RBFAQ8N0V3 343 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 OR2W6PQ8NHA6 318 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 DCUN1D1Q96GG9 259 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PAFAH2Q99487 392 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 CPNE1Q99829 537 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 MCMBPQ9BTE3 642 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 OR2AG1Q9H205 316 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 TRIM39Q9HCM9 518 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 INTS10Q9NVR2 710 aaKnown RBP11.77□□□□□ -0.53
PVT1-215ENST00000522963 NSMCE4AQ9NXX6 385 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PLAAQ9Y263 795 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 CRYL1Q9Y2S2 319 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PCDHGB2Q9Y5G2 931 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 PRSS21Q9Y6M0 314 aa11.77□□□□□ -0.53
PVT1-215ENST00000522963 EXOC1LA0A1B0GW35 172 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 UBA6A0AVT1 1052 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 MED19A0JLT2 244 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 CFAP99D6REC4 459 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 POC1B-GALNT4F8VUJ3 575 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 H3BM21 787 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 PRMT5O14744 637 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 PFDN6O15212 129 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 SGTAO43765 313 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 PCDHGA12O60330 932 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CDK14O94921 469 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 ASMTLO95671 621 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 FUCA1P04066 466 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CEACAM5P06731 702 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 CEACAM1P13688 526 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 ZNF7P17097 686 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 ZNF8P17098 575 aaPredicted RBP11.76□□□□□ -0.53
PVT1-215ENST00000522963 JUNDP17535 347 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 RPS3P23396 243 aaKnown RBP eCLIP11.76□□□□□ -0.53
PVT1-215ENST00000522963 HTR1BP28222 390 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 GCAP28676 217 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 FMO4P31512 558 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 GP5P40197 560 aa11.76□□□□□ -0.53
PVT1-215ENST00000522963 NSG1P42857 185 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms