RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	ADAM5	Q6NVV9	412 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	PLXDC2	Q6UX71	529 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	IKBIP	Q70UQ0	350 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZNF534	Q76KX8	674 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	RSRC2	Q7L4I2	434 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	CCDC190	Q86UF4	302 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	MCEMP1	Q8IX19	187 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	C1orf52	Q8N6N3	182 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	PAF1	Q8N7H5	531 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	RBM15B	Q8NDT2	890 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	GRAPL	Q8TC17	118 aa	Predicted RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	PPP4R1	Q8TF05	950 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	SCFD2	Q8WU76	684 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZKSCAN4	Q969J2	545 aa	Predicted RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	MOAP1	Q96BY2	351 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	EVI5L	Q96CN4	794 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	ELMOD3	Q96FG2	381 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	CMTM3	Q96MX0	182 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	NUDCD1	Q96RS6	583 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	NAP1L4	Q99733	375 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	TFB2M	Q9H5Q4	396 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	KAT14	Q9H8E8	782 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	DBNL	Q9UJU6	430 aa	Known RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	ACAD8	Q9UKU7	415 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	NENF	Q9UMX5	172 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	FAF1	Q9UNN5	650 aa	Predicted RBP	3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	YIPF1	Q9Y548	306 aa		3.99	□□□□□ -1.77
PTPN12-215	ENST00000522115	EDIL3	O43854	480 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	HS6ST1	O60243	411 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	RARG	P13631	454 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	GABRB1	P18505	474 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	PAX3	P23760	479 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	NR2F2	P24468	414 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	PPARG	P37231	505 aa	Predicted RBP	3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	MSH2	P43246	934 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	CAMP	P49913	170 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	CRIP2	P52943	208 aa	Predicted RBP	3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	LINC01547	P58512	204 aa	Predicted RBP	3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZSCAN23	Q3MJ62	389 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	SLC27A1	Q6PCB7	646 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	PACS1	Q6VY07	963 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	CERS3	Q8IU89	383 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	KLHDC8B	Q8IXV7	354 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	TMTC2	Q8N394	836 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	WDTC1	Q8N5D0	677 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	ANKRD52	Q8NB46	1076 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	FAM76A	Q8TAV0	307 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	SMPDL3B	Q92485	455 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZNF524	Q96C55	264 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZNF501	Q96CX3	271 aa	Predicted RBP	3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	FBXO17	Q96EF6	278 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	NEUROD6	Q96NK8	337 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	SLC22A12	Q96S37	553 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	PLK3	Q9H4B4	646 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	KRT84	Q9NSB2	600 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	SMC4	Q9NTJ3	1288 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	OGFR	Q9NZT2	677 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	EXO1	Q9UQ84	846 aa	Known RBP	3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	CMAHP	Q9Y471	501 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	TAF1	P21675	1872 aa		3.98	□□□□□ -1.77
PTPN12-215	ENST00000522115	PMS2P5	A8MQ11	134 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	PLPP2	O43688	288 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	GPC4	O75487	556 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	AMBP	P02760	352 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	TUBB	P07437	444 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	FGF5	P12034	268 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	CDH8	P55286	799 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	TUBB4B	P68371	445 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	TECRL	Q5HYJ1	363 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	WDR38	Q5JTN6	314 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZDHHC20	Q5W0Z9	365 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	FAM180B	Q6P0A1	224 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	C1orf122	Q6ZSJ8	110 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	MAATS1	Q7Z4T9	603 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	GALNT5	Q7Z7M9	940 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	TBC1D1	Q86TI0	1168 aa	Predicted RBP	3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	LONP2	Q86WA8	852 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	CEP97	Q8IW35	865 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	ADGRF2	Q8IZF7	708 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	SMC6	Q96SB8	1091 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	TREX2	Q9BQ50	279 aa	Predicted RBP	3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	SLX1A	Q9BQ83	275 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	RBM4	Q9BWF3	364 aa	Known RBP	3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZBTB20	Q9HC78	741 aa	Predicted RBP	3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	FBXL17	Q9UF56	701 aa		3.97	□□□□□ -1.77
PTPN12-215	ENST00000522115	OR2M5	A3KFT3	312 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115		H3BQ06	376 aa	Predicted RBP	3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	PCDH7	O60245	1069 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	GH2	P01242	217 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	TFAP2A	P05549	437 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	CAPN3	P20807	821 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	TNFAIP3	P21580	790 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	PON1	P27169	355 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	MAPK4	P31152	587 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	PSMB10	P40306	273 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	DUOXA1	Q1HG43	343 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	CHST9	Q7L1S5	443 aa		3.96	□□□□□ -1.78
PTPN12-215	ENST00000522115	ARID3B	Q8IVW6	561 aa	Predicted RBP	3.96	□□□□□ -1.78

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