RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	HOXA4	Q00056	320 aa	Predicted RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	GALK2	Q01415	458 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	KARS	Q15046	597 aa	Known RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	TSTD2	Q5T7W7	516 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	PAPD4	Q6PIY7	484 aa	Known RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	BRAT1	Q6PJG6	821 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	NHLRC1	Q6VVB1	395 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	B3GNT6	Q6ZMB0	384 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	MTSS1L	Q765P7	747 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	MEPCE	Q7L2J0	689 aa	Known RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	ZER1	Q7Z7L7	766 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	RPAIN	Q86UA6	219 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	PALM2	Q8IXS6	379 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	MRPL43	Q8N983	215 aa	Known RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	SCCPDH	Q8NBX0	429 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	CNNM3	Q8NE01	707 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	MCPH1	Q8NEM0	835 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	OR52E1	Q8NGJ3	308 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	HMGCLL1	Q8TB92	370 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	EDA	Q92838	391 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	EME1	Q96AY2	570 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	P2RY11	Q96G91	374 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	PRMT6	Q96LA8	375 aa	Predicted RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	ZNF560	Q96MR9	790 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	CRAMP1	Q96RY5	1269 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	WDR83	Q9BRX9	315 aa	Known RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	EFHD1	Q9BUP0	239 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	SSBP3	Q9BWW4	388 aa	Predicted RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	DPH5	Q9H2P9	285 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	MYNN	Q9NPC7	610 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC2A4RG	Q9NR83	387 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	OSER1	Q9NX31	292 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	AATF	Q9NY61	560 aa	Known RBP eCLIP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	SPAST	Q9UBP0	616 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	ST6GALNAC2	Q9UJ37	374 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	NUDC	Q9Y266	331 aa		3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	EPN1	Q9Y6I3	576 aa	Predicted RBP	3.59	□□□□□ -1.84
SREK1-208	ENST00000520580	FOXO6	A8MYZ6	492 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	MAP2K7	O14733	419 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	INPPL1	O15357	1258 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TOP3B	O95985	862 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	WNT1	P04628	370 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	MYF6	P23409	242 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	AHCY	P23526	432 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	CCND3	P30281	292 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	DCTD	P32321	178 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PLA2G5	P39877	138 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	SMS	P52788	366 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	AKAP17A	Q02040	695 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ZXDC	Q2QGD7	858 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	SPOUT1	Q5T280	376 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	STRIP1	Q5VSL9	837 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	DCAF12L2	Q5VW00	463 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	CASC4	Q6P4E1	433 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PPP1R42	Q7Z4L9	355 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PIGW	Q7Z7B1	504 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	AMIGO2	Q86SJ2	522 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TMC8	Q8IU68	726 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	MB21D2	Q8IYB1	491 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	SAMD14	Q8IZD0	417 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	OR2AJ1	Q8NGZ0	328 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	NCOA7	Q8NI08	942 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	EXTL1	Q92935	676 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	MUS81	Q96NY9	551 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	CPNE1	Q99829	537 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	KCNN2	Q9H2S1	579 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ESRP2	Q9H6T0	727 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	LMAN1L	Q9HAT1	526 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	RHCG	Q9UBD6	479 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	LEF1	Q9UJU2	399 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PADI2	Q9Y2J8	665 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580		A0A087WV48	116 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PIPSL	A2A3N6	862 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	MAGEA13P	A6NCF6	341 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TMEM8B	A6NDV4	472 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ANKUB1	A6NFN9	424 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	C5orf52	A6NGY3	159 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PPP6C	O00743	305 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC30A4	O14863	429 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TSPAN15	O95858	294 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ABHD2	P08910	425 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ETS1	P14921	441 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TAL1	P17542	331 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	UBA1	P22314	1058 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ACAT1	P24752	427 aa	Known RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	PSMB4	P28070	264 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	KHK	P50053	298 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	GCNT1	Q02742	428 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TRIM29	Q14134	588 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	LPIN1	Q14693	890 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	TWISTNB	Q3B726	338 aa	Predicted RBP	3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	AARD	Q4LEZ3	155 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	HS1BP3	Q53T59	392 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ABHD17B	Q5VST6	288 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	KCNV1	Q6PIU1	500 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	C1orf186	Q6ZWK4	172 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	ZDHHC23	Q8IYP9	409 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	SLC25A41	Q8N5S1	370 aa		3.58	□□□□□ -1.84
SREK1-208	ENST00000520580	BOLL	Q8N9W6	283 aa	Known RBP	3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms