RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CDK7P50613 346 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 VAMP7P51809 220 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PMS2P54278 862 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 POLE2P56282 527 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SLC37A1P57057 533 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 UBASH3AP57075 661 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 KRTAP10-3P60369 221 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PSMC6P62333 389 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TNNC1P63316 161 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 RBP5P82980 135 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 MYL7Q01449 175 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TLE2Q04725 743 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 MBTD1Q05BQ5 628 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PMPCAQ10713 525 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 BFSP1Q12934 665 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 GRIK3Q13003 919 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 STK4Q13043 487 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 BIRC3Q13489 604 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CAPSQ13938 189 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TMEM132DQ14C87 1099 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 IL17AQ16552 155 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SNRNP35Q16560 246 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 UGCGQ16739 394 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PTPROQ16827 1216 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 DUSP6Q16828 381 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 EXOC3L4Q17RC7 722 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SGSM1Q2NKQ1 1148 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TRIM60Q495X7 471 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TCP11X2Q5H9J9 407 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FSCBQ5H9T9 825 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FBXO47Q5MNV8 452 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 ENTPD8Q5MY95 495 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 MARCH8Q5T0T0 291 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SPOUT1Q5T280 376 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 RNF220Q5VTB9 566 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 KRT39Q6A163 491 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CENPPQ6IPU0 288 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 KLHL10Q6JEL2 608 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 ADAM5Q6NVV9 412 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 GBP6Q6ZN66 633 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CACNA2D4Q7Z3S7 1137 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TADA2BQ86TJ2 420 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CAMK1DQ8IU85 385 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 WDR49Q8IV35 697 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 NELFCDQ8IXH7 590 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FAM186BQ8IYM0 893 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 THEM5Q8N1Q8 247 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TMEM86AQ8N2M4 240 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 LRRC43Q8N309 656 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SPEM1Q8N4L4 309 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 LRRC52Q8N7C0 313 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 KDM1BQ8NB78 822 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FBXL13Q8NEE6 735 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CCDC112Q8NEF3 446 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SRFBP1Q8NEF9 429 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 APPL2Q8NEU8 664 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 NEK11Q8NG66 645 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SPATA18Q8TC71 538 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 GPT2Q8TD30 523 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 DNAJC19Q96DA6 116 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TNIP3Q96KP6 325 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SPAG5Q96R06 1193 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 YME1L1Q96TA2 773 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PCYT2Q99447 389 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FAM213AQ9BRX8 229 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TMEM175Q9BSA9 504 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TUBGCP2Q9BSJ2 902 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 COLEC11Q9BWP8 271 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 NAA15Q9BXJ9 866 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 EDEM3Q9BZQ6 932 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 CDH19Q9H159 772 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 TRPV6Q9H1D0 765 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 BLZF1Q9H2G9 400 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PDCL3Q9H2J4 239 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 GOLPH3LQ9H4A5 285 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 FAM204AQ9H8W3 233 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SDF2L1Q9HCN8 221 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PNRC2Q9NPJ4 139 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 AGPAT3Q9NRZ7 376 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 RBAKQ9NYW8 714 aaPredicted RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 IGSF9Q9P2J2 1179 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 MAN1B1Q9UKM7 699 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 KIAA1257Q9ULG3 409 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 PADI3Q9ULW8 664 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 UBQLN1Q9UMX0 589 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 NFE2L3Q9Y4A8 694 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 BZW2Q9Y6E2 419 aaKnown RBP1.93□□□□□ -2.1
CCNC-208ENST00000519617 STYXL1Q9Y6J8 313 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 LRRC37A2A6NM11 1700 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SMCHD1A6NHR9 2005 aa1.93□□□□□ -2.1
CCNC-208ENST00000519617 SF3B1O75533 1304 aaKnown RBP eCLIP1.92□□□□□ -2.12e-9■■■■■ 80.4
CCNC-208ENST00000519617 MYH11P35749 1972 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 SCN10AQ9Y5Y9 1956 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 ANKRD62A6NC57 917 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 A6NNZ2 444 aa1.92□□□□□ -2.1
CCNC-208ENST00000519617 ERI2A8K979 691 aaKnown RBP1.92□□□□□ -2.1
CCNC-208ENST00000519617 MS4A18H0YCH9 400 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms