RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CASS4Q9NQ75 786 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 CPNE7Q9UBL6 633 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 FAM8A1Q9UBU6 413 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-219ENST00000518824 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
VEGFA-219ENST00000518824 PKD1L2Q7Z442 2459 aa13.08□□□□□ -0.31
VEGFA-219ENST00000518824 CCDC187A0A096LP49 1063 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 GPR89AB7ZAQ6 455 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 PSMD3O43242 534 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 APRTP07741 180 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 GPR89BP0CG08 455 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 AKT1P31749 480 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 CCKBRP32239 447 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 ACTN2P35609 894 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 VPS41P49754 854 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 CRADDP78560 199 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 BIRC2Q13490 618 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 GTF2H3Q13889 308 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 MAP9Q49MG5 647 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 PHF19Q5T6S3 580 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 SERPINA9Q86WD7 417 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 NXPE1Q8N323 547 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 JPH3Q8WXH2 748 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-219ENST00000518824 LIN37Q96GY3 246 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-219ENST00000518824 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
VEGFA-219ENST00000518824 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 OSBPL9Q96SU4 736 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 SLC38A3Q99624 504 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 SARS2Q9NP81 518 aaKnown RBP13.08□□□□□ -0.32
VEGFA-219ENST00000518824 KCNK4Q9NYG8 393 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 OGFRQ9NZT2 677 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 PAK5Q9P286 719 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 CRLS1Q9UJA2 301 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-219ENST00000518824 PSMD13Q9UNM6 376 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 SLC30A1Q9Y6M5 507 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 LAMA5O15230 3695 aa13.08□□□□□ -0.32
VEGFA-219ENST00000518824 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-219ENST00000518824 TRBV5-4A0A0C4DH59 114 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 IGHV5-10-1A0A0J9YXX1 117 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 CCDC162PA2VCL2 907 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PDZK1P1A8MUH7 402 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 E7EVH7 732 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 H7C0S8 307 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 FANCGO15287 622 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 TNFSF15O95150 251 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 CPNE6O95741 557 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 MSH3P20585 1137 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PSMA3P25788 255 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 EIF2S3P41091 472 aaKnown RBP13.07□□□□□ -0.32
VEGFA-219ENST00000518824 MAPK9P45984 424 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 GPR3P46089 330 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 LMAN1P49257 510 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 CDH17Q12864 832 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 DBN1Q16643 649 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 ZRANB3Q5FWF4 1079 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 ABRAXAS1Q6UWZ7 409 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PPP1R21Q6ZMI0 780 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 ZNF534Q76KX8 674 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 RAB11FIP2Q7L804 512 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 SNX20Q7Z614 316 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PIM3Q86V86 326 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 SPDYE1Q8NFV5 336 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-219ENST00000518824 OR13J1Q8NGT2 312 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 GPR150Q8NGU9 434 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 WDR36Q8NI36 951 aaKnown RBP13.07□□□□□ -0.32
VEGFA-219ENST00000518824 STYXQ8WUJ0 223 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PMEPA1Q969W9 287 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 CCDC74BQ96LY2 380 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 SLC46A1Q96NT5 459 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 CFAP20Q9Y6A4 193 aaKnown RBP13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PRSS21Q9Y6M0 314 aa13.07□□□□□ -0.32
VEGFA-219ENST00000518824 PIKFYVEQ9Y2I7 2098 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 KIR2DS5A0A0G2JLQ3 304 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 A0A0G2JNG1 304 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 CDRT15L2A8MXV6 281 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 KIR2DS3K7RE56 304 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 DXOO77932 396 aaKnown RBP13.06□□□□□ -0.32
VEGFA-219ENST00000518824 CCL4P13236 92 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 XRCC1P18887 633 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-219ENST00000518824 ITGALP20701 1170 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 FOXN2P32314 431 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 HADHAP40939 763 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 SESN2P58004 480 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-219ENST00000518824 BASP1P80723 227 aaKnown RBP13.06□□□□□ -0.32
VEGFA-219ENST00000518824 PDE1BQ01064 536 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 DMPKQ09013 629 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 CCDC173Q0VFZ6 552 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 KIR2DS5Q14953 304 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 COL28A1Q2UY09 1125 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
VEGFA-219ENST00000518824 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms