RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 TRIP12Q14669 1992 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-207ENST00000518569 LOC100509620A0A075B734 347 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CTAGE9A4FU28 777 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 OR5K3A6NET4 321 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 C15orf62A8K5M9 175 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 PRSS44E7EML9 344 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CCER2I3L3R5 266 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CTDSP2O14595 271 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 PLPP2O43688 288 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 F7P08709 466 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CTAGE8P0CG41 777 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ITGA2P17301 1181 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 GM2AP17900 193 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 DGKAP23743 735 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 GCH1P30793 250 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF132P52740 706 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ISL1P61371 349 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 RUNX1T1Q06455 604 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CXCL9Q07325 125 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE5Q13069 117 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 GAGE6Q13070 117 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 PCLAFQ15004 111 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ZRSR1Q15695 479 aaKnown RBP3.56□□□□□ -1.84
VPS13B-207ENST00000518569 NTRK2Q16620 822 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 MEP1AQ16819 746 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF672Q499Z4 452 aaPredicted RBP3.56□□□□□ -1.84
VPS13B-207ENST00000518569 FOXL2NBQ6ZUU3 175 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF534Q76KX8 674 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CEP97Q8IW35 865 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CTAGE4Q8IX94 777 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 IL17RCQ8NAC3 791 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 POC1AQ8NBT0 407 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 PHF21AQ96BD5 680 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CEP295NLQ96MC4 621 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 SLC22A12Q96S37 553 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 LRRC1Q9BTT6 524 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 CSTL1Q9H114 145 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 LRMDAQ9H2I8 198 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 RETREG1Q9H6L5 497 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 GIMAP4Q9NUV9 329 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 POLG2Q9UHN1 485 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 KCNG2Q9UJ96 466 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 RALYQ9UKM9 306 aaKnown RBP3.56□□□□□ -1.84
VPS13B-207ENST00000518569 LRP12Q9Y561 859 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 SNX8Q9Y5X2 465 aa3.56□□□□□ -1.84
VPS13B-207ENST00000518569 ZNF541Q9H0D2 1346 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 LNP1A1A4G5 178 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 J3QR06 171 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 DVL1O14640 695 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 NDUFS4O43181 175 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 BUB3O43684 328 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 GJB3O75712 270 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 LDHCP07864 332 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 MMP9P14780 707 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 PRLRP16471 622 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 SAT1P21673 171 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 BDNFP23560 247 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 COPB2P35606 906 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 AHRP35869 848 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 ARCN1P48444 511 aaKnown RBP3.55□□□□□ -1.84
VPS13B-207ENST00000518569 NRIP1P48552 1158 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 SUOXP51687 545 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 ARSEP51690 589 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 MLLT10P55197 1068 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 SNX16P57768 344 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 COG7P83436 770 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 CCDC96Q2M329 555 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 ACCSLQ4AC99 568 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 OR7E24Q6IFN5 339 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 ADGRA1Q86SQ6 560 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 METTL27Q8N6F8 245 aaPredicted RBP3.55□□□□□ -1.84
VPS13B-207ENST00000518569 RDM1Q8NG50 284 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 BBS10Q8TAM1 723 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 NUDT16L1Q9BRJ7 211 aaKnown RBP3.55□□□□□ -1.84
VPS13B-207ENST00000518569 KIFC3Q9BVG8 833 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 MRPL1Q9BYD6 325 aaKnown RBP3.55□□□□□ -1.84
VPS13B-207ENST00000518569 KRTAP1-5Q9BYS1 174 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 RTN4RQ9BZR6 473 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 DNAJC18Q9H819 358 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 ARHGEF38Q9NXL2 777 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 TSPYL4Q9UJ04 414 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 PLAGL1Q9UM63 463 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 YIPF1Q9Y548 306 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 RB1CC1Q8TDY2 1594 aa3.55□□□□□ -1.84
VPS13B-207ENST00000518569 TAF1P21675 1872 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 ASTN2O75129 1339 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 OR2M5A3KFT3 312 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 EIF3DO15371 548 aaKnown RBP eCLIP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 ZBTB43O43298 467 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 AHCYL1O43865 530 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 AVILO75366 819 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 RSL1D1O76021 490 aaKnown RBP3.54□□□□□ -1.84
VPS13B-207ENST00000518569 PDE9AO76083 593 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 PGM3O95394 542 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 TUBBP07437 444 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 NR2F2P24468 414 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 ACTN2P35609 894 aa3.54□□□□□ -1.84
VPS13B-207ENST00000518569 EIF2DP41214 584 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms