RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 RIN1Q13671 783 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 DOC2AQ14183 400 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 USP10Q14694 798 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 NCAPD2Q15021 1401 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ME3Q16798 604 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 FAM98BQ52LJ0 330 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 SOWAHCQ53LP3 525 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARL13AQ5H913 290 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRRC73Q5JTD7 316 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZNF385CQ66K41 422 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HIST2H2BCQ6DN03 193 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HIST2H2BDQ6DRA6 164 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ANKRD16Q6P6B7 361 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 NOTUMQ6P988 496 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 FOXR2Q6PJQ5 311 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 LCTLQ6UWM7 567 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 Q6ZUG5 572 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRRC70Q7Z2Q7 622 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TBC1D26Q86UD7 250 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 RTN4RL2Q86UN3 420 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 WDR5BQ86VZ2 330 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PSTKQ8IV42 348 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 NPAS3Q8IXF0 933 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ELOA2Q8IYF1 753 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ZDHHC23Q8IYP9 409 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ARL14Q8N4G2 192 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ANKRD13CQ8N6S4 541 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 GBP7Q8N8V2 638 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 B4GALNT2Q8NHY0 566 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 XAGE5Q8WWM1 108 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ITFG2Q969R8 447 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC25A28Q96A46 364 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CTHRC1Q96CG8 243 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 LINGO1Q96FE5 620 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 OTUB1Q96FW1 271 aaPredicted RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 C16orf58Q96GQ5 468 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 CDKN2AIPNLQ96HQ2 116 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TPD52L3Q96J77 140 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 HARBI1Q96MB7 349 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 LRRC3BQ96PB8 259 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLIN2Q99541 437 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 SLC39A3Q9BRY0 314 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 ABHD14AQ9BUJ0 271 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TPSD1Q9BZJ3 242 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 FARSBQ9NSD9 589 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PNPLA3Q9NST1 481 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 RAB20Q9NX57 234 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 MTMR10Q9NXD2 777 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 NDUFA13Q9P0J0 144 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 TBC1D7Q9P0N9 293 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PTGFRNQ9P2B2 879 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 UBQLN2Q9UHD9 624 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 PLA2G4CQ9UP65 541 aa3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 YBX2Q9Y2T7 364 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 NOSIPQ9Y314 301 aaKnown RBP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU4-60P-201ENST00000517239 KIAA1217Q5T5P2 1943 aa3.9□□□□□ -1.78
RNU4-60P-201ENST00000517239 GOLGA6L7A0A1B0GV03 622 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SERTM2A0A1B0GWG4 89 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MACROD2A1Z1Q3 448 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 TYW5A2RUC4 315 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MFSD2BA6NFX1 497 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 KBTBD13C9JR72 458 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MCIDASD6RGH6 385 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 AP4M1O00189 453 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 EBAG9O00559 213 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CES2O00748 559 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ABLIM1O14639 778 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC16A3O15427 465 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 POLR2DO15514 142 aaKnown RBP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MED7O43513 233 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 FLOT1O75955 427 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 RHOBTB1O94844 696 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLITRK3O94933 977 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CH25HO95992 272 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CLUP10909 449 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ANXA8P13928 327 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 UGT1A6P19224 532 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATP6V1C1P21283 382 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SFPQP23246 707 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 GABRA5P31644 462 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 AKT2P31751 481 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 GKP32189 559 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SHMT1P34896 483 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 LIPAP38571 399 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 CDKN1AP38936 164 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 STAT6P42226 847 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 EPS15P42566 896 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRCPP42785 496 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 MAGEB1P43366 347 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC6A12P48065 614 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 HTR6P50406 440 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 NCKAP1LP55160 1127 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 HSD11B2P80365 405 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SPAG1Q07617 926 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 DMWDQ09019 674 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 GAB1Q13480 694 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 IDI1Q13907 227 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SQLEQ14534 574 aa3.9□□□□□ -1.79
RNU4-60P-201ENST00000517239 SHBQ15464 509 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms