RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TTC25Q96NG3 672 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 OR6C1Q96RD1 312 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 SLC40A1Q9NP59 571 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 HACD3Q9P035 362 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 KCND3Q9UK17 655 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 CROTQ9UKG9 612 aa14.35□□□□□ -0.11
SCARNA20.5-201ENST00000516991 FLNCQ14315 2725 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 MKRN2OSH3BPM6 223 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 MTX2O75431 263 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 PMPCBO75439 489 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 KIAA0754O94854 1291 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 MT-CYBP00156 380 aaPredicted RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 FGF5P12034 268 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 ZNF28P17035 718 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 RPL10P27635 214 aaKnown RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 HMGCLP35914 325 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 SLC1A1P43005 524 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 LEPRP48357 1165 aaKnown RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 NR2C2P49116 596 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 DMPKQ09013 629 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 PRKD1Q15139 912 aaPredicted RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 ATP13A5Q4VNC0 1218 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 KHDC1Q4VXA5 237 aaKnown RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 KLHL35Q6PF15 583 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 PPP1R3BQ86XI6 285 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 RHOT1Q8IXI2 618 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 GALNT6Q8NCL4 622 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 KLHL6Q8WZ60 621 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 UBXN4Q92575 508 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 RSC1A1Q92681 617 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 ZNF71Q9NQZ8 489 aaPredicted RBP14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 LNPEPQ9UIQ6 1025 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 POLHQ9Y253 713 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
SCARNA20.5-201ENST00000516991 OR52A4PA6NMU1 304 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CBFA2T2O43439 604 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 RECKO95980 971 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 EPOP01588 193 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CCNYL3P0C7X3 344 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PTPN3P26045 913 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SPAM1P38567 509 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 DYNLT1P63172 113 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SH3BP2P78314 561 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 TMEM115Q12893 351 aaPredicted RBP14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 COLEC12Q5KU26 742 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 LDLRAP1Q5SW96 308 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 IRGCQ6NXR0 463 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 C11orf96Q7Z7L8 435 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 AMZ2Q86W34 360 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 TFB1MQ8WVM0 346 aaKnown RBP14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SEC14L1Q92503 715 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ABHD17AQ96GS6 310 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 FCRL4Q96PJ5 515 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PDE7BQ9NP56 450 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SEMA5BQ9P283 1151 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 TMPRSS11EQ9UL52 423 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 MRPS18BQ9Y676 258 aaKnown RBP14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KCNMB2Q9Y691 235 aa14.33□□□□□ -0.12
SCARNA20.5-201ENST00000516991 C21orf140B9A014 251 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 AURKAO14965 403 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SPOPO43791 374 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SPAG6O75602 509 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 FECHP22830 423 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 F8A1P23610 371 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 DRG2P55039 364 aaKnown RBP14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 WNT3AP56704 352 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KLRB1Q12918 225 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ATP1A1-AS1Q5TC04 95 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KDELC1Q6UW63 502 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 FAM92BQ6ZTR7 304 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 BPHLQ86WA6 291 aaPredicted RBP14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KMT5CQ86Y97 462 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 TTC30BQ8N4P2 665 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SIDT2Q8NBJ9 832 aaKnown RBP14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 DDHD1Q8NEL9 900 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 SLC41A2Q96JW4 573 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CCDC42Q96M95 316 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CD180Q99467 661 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 VAT1Q99536 393 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 BPIFA1Q9NP55 256 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 IL26Q9NPH9 171 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 ABHD10Q9NUJ1 306 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PADI1Q9ULC6 663 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 INTUQ9ULD6 942 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 TP53TG5Q9Y2B4 290 aa14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
SCARNA20.5-201ENST00000516991 LOC285095A0A1B0GVY8 99 aa14.31□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KLHL33A6NCF5 533 aa14.31□□□□□ -0.12
SCARNA20.5-201ENST00000516991 CYSRT1A8MQ03 144 aa14.31□□□□□ -0.12
SCARNA20.5-201ENST00000516991 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
SCARNA20.5-201ENST00000516991 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms