RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 DPP9Q86TI2 863 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 SLC35F3Q8IY50 421 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 KIAA2013Q8IYS2 634 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 OR4C3Q8NH37 302 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 IPO4Q8TEX9 1081 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 PSMB7Q99436 277 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 CDX2Q99626 313 aaPredicted RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 PRPF18Q99633 342 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 EIF2AK1Q9BQI3 630 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 TUBB1Q9H4B7 451 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 ATP13A3Q9H7F0 1226 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 SEBOXQ9HB31 216 aaPredicted RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 GPR108Q9NPR9 543 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 HINT3Q9NQE9 182 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 TM7SF3Q9NS93 570 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 KRT84Q9NSB2 600 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 NDE1Q9NXR1 346 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 FLRT3Q9NZU0 649 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 ZNF69Q9UC07 566 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 DDX20Q9UHI6 824 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 FBXL2Q9UKC9 423 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 DAPP1Q9UN19 280 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 TMA7Q9Y2S6 64 aaKnown RBP0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 NAALAD2Q9Y3Q0 740 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 COL1A2P08123 1366 aa0.18□□□□□ -2.38
SCARNA23-201ENST00000516060 E2F8A0AVK6 867 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 LRCOL1A6NCL2 159 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 TRIM49BA6NDI0 452 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 FAM90A20PA6NIJ5 464 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 C15orf61A6NNL5 157 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 TEX22C9J3V5 150 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 IRAK2O43187 625 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 GPR137BO60478 399 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 NBNO60934 754 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 WISP3O95389 354 aaPredicted RBP0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 ASNSP08243 561 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 HNF1BP35680 557 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CAPGP40121 348 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 PNPLA4P41247 253 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 STT3AP46977 705 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 LMAN1P49257 510 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 BLKP51451 505 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CLCN4P51793 760 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CASP5P51878 434 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 MECOMQ03112 1051 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CHRNDQ07001 517 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 GRIK3Q13003 919 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 EDRF1Q3B7T1 1238 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 ARHGAP29Q52LW3 1261 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 TFDP3Q5H9I0 405 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 UTF1Q5T230 341 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 TTC22Q5TAA0 569 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 ASPHD2Q6ICH7 369 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 PPP4R4Q6NUP7 873 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 NFRKBQ6P4R8 1299 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 GIMAP6Q6P9H5 292 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 Q75L30 129 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 RTL3Q8N8U3 475 aaKnown RBP0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 NUP37Q8NFH4 326 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 C11orf45Q8TAV5 145 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 SPPL3Q8TCT6 385 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 ATP8B4Q8TF62 1192 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 NPRL2Q8WTW4 380 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 U2AF1L4Q8WU68 220 aaKnown RBP0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 DYRK2Q92630 601 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 SARGQ9BW04 601 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 BRD8Q9H0E9 1235 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 TTC12Q9H892 705 aaPredicted RBP0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 MAGEE1Q9HCI5 957 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 BEX4Q9NWD9 120 aaPredicted RBP0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 ZNF319Q9P2F9 582 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 GRID1Q9ULK0 1009 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CARD8Q9Y2G2 431 aa0.17□□□□□ -2.38
SCARNA23-201ENST00000516060 CCDC194A0A1B0GVG4 234 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 PI4K2BG5E9Z4 385 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 DNM1LO00429 736 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 BCAT2O15382 392 aaPredicted RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 MAGEB4O15481 346 aaPredicted RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 ASNA1O43681 348 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 BUD23O43709 281 aaKnown RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 POP4O95707 220 aaKnown RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 FTCDO95954 541 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 GPIP06744 558 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 KRT19P08727 400 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 CSF1P09603 554 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 SLC2A4P14672 509 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 MDKP21741 143 aaPredicted RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 EEF1GP26641 437 aaKnown RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 UBA7P41226 1012 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 PAX9P55771 341 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 PPIAP62937 165 aaKnown RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 YWHAZP63104 245 aaKnown RBP0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 MCL1Q07820 350 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 RUNX3Q13761 415 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 Q1RN00 199 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 CDONQ4KMG0 1287 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 FRRS1Q6ZNA5 592 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 ZNF534Q76KX8 674 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 PIGZQ86VD9 579 aa0.16□□□□□ -2.38
SCARNA23-201ENST00000516060 PHC2Q8IXK0 858 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms