RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 OR1J2Q8NGS2 313 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 ARHGEF26Q96DR7 871 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 STAMBPL1Q96FJ0 436 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 NEUROD6Q96NK8 337 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 FSD1Q9BTV5 496 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 STK39Q9UEW8 545 aa3.63□□□□□ -1.83
LINC01088-211ENST00000515597 KIF21BO75037 1637 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 A0A1W2PPI3 338 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 KANSL1LA0AUZ9 987 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 B4E171 279 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ANKRD66B4E2M5 251 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 CLEC3BP05452 202 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PAX3P23760 479 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PSMA4P25789 261 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TSPAN7P41732 249 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PRCPP42785 496 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 NR2C2P49116 596 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 MLLT10P55197 1068 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 MRPS34P82930 218 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 DDX10Q13206 875 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ACVR2BQ13705 512 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PDE1CQ14123 709 aaPredicted RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 FRG1Q14331 258 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 KIR2DS3Q14952 304 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TSTQ16762 297 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PNLIPRP3Q17RR3 467 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TECRLQ5HYJ1 363 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ZC2HC1BQ5TFG8 222 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 NSUN5P2Q63ZY6 315 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 FAAH2Q6GMR7 532 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 SEPT14Q6ZU15 432 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PIWIL4Q7Z3Z4 852 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 STPG4Q8N801 248 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 SLC38A9Q8NBW4 561 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 RBM15BQ8NDT2 890 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 UTP15Q8TED0 518 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM190Q8WZ59 177 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 MPP4Q96JB8 637 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ZNF599Q96NL3 588 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 SEPT5Q99719 369 aaPredicted RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 ZHX3Q9H4I2 956 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 DIAPH3Q9NSV4 1193 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 CWC15Q9P013 229 aaKnown RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 KLHL9Q9P2J3 617 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 COPG2Q9UBF2 871 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM184BQ9Y519 407 aaPredicted RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 MED1Q15648 1581 aaPredicted RBP3.62□□□□□ -1.83
LINC01088-211ENST00000515597 TOP2BQ02880 1626 aa3.62□□□□□ -1.83
LINC01088-211ENST00000515597 PRAG1Q86YV5 1406 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 GRIN2AQ12879 1464 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 STRCQ7RTU9 1775 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 GLI2P10070 1586 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 A0A0G2JNG1 304 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM178BH3BS89 294 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 DAB1O75553 588 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 WISP2O76076 250 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 IPO7O95373 1038 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TBX18O95935 607 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 ERVK-10P10266 1014 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 MCCP23508 829 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 CHMP24386 653 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 HOXC8P31273 242 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 HOXC13P31276 330 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 MAN1A1P33908 653 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 GNB1P62873 340 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 KIR2DS5Q14953 304 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TBCEQ15813 527 aaPredicted RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 ADIPOQQ15848 244 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 LPAL2Q16609 132 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 PLXDC2Q6UX71 529 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 RSRC2Q7L4I2 434 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 NOTCH2NLQ7Z3S9 236 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TRPT1Q86TN4 253 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 PM20D2Q8IYS1 436 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 RNF168Q8IYW5 571 aaPredicted RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM116Q8NCL8 245 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 PPHLN1Q8NEY8 458 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 TDRD7Q8NHU6 1098 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 HM13Q8TCT9 377 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 UCMAQ8WVF2 138 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 FCAMRQ8WWV6 532 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 SGCDQ92629 289 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 HDAC2Q92769 488 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 PDZD7Q9H5P4 517 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 RANGRFQ9HD47 186 aaPredicted RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 OLA1Q9NTK5 396 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 EHD2Q9NZN4 543 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 LIMA1Q9UHB6 759 aaKnown RBP3.61□□□□□ -1.83
LINC01088-211ENST00000515597 FBXW11Q9UKB1 542 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 ACAD8Q9UKU7 415 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 KCNE2Q9Y6J6 123 aa3.61□□□□□ -1.83
LINC01088-211ENST00000515597 CCDC88BA6NC98 1476 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 FGD5Q6ZNL6 1462 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 EIF4E1BA6NMX2 242 aaKnown RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ATP2A1O14983 1001 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 CIDEAO60543 219 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 SLC25A12O75746 678 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 MLYCDO95822 493 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms