RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 AZIN1O14977 448 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 SNX2O60749 519 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TRIM16O95361 564 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 GM2AP17900 193 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 DGKAP23743 735 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 B4GALNT1Q00973 533 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 MESP2Q0VG99 397 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 HERC3Q15034 1050 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 KANK2Q63ZY3 851 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 MYO1HQ8N1T3 1032 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 TRPC4APQ8TEL6 797 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 NAT14Q8WUY8 206 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 NXPE3Q969Y0 559 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 RTKNQ9BST9 563 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 ZBTB26Q9HCK0 441 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 CD274Q9NZQ7 290 aa14.76□□□□□ -0.05
VCAN-211ENST00000513984 COPG1Q9Y678 874 aaKnown RBP14.76□□□□□ -0.05
VCAN-211ENST00000513984 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 RGSL1A5PLK6 1076 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 NCF1BA6NI72 391 aaPredicted RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 NCF1CA8MVU1 366 aaPredicted RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 PRRT4C9JH25 899 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 PEX11AO75192 247 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 THRAP10827 490 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 NCF1P14598 390 aaPredicted RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 ITGB6P18564 788 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 CCND1P24385 295 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 SLC6A11P48066 632 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 AGTR2P50052 363 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 PDGFRLQ15198 375 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 RAB30Q15771 203 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 PPP1R3AQ16821 1122 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 TMEM184AQ6ZMB5 413 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 DPPA4Q7L190 304 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 SUGP1Q8IWZ8 645 aaKnown RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 RP9Q8TA86 221 aaKnown RBP14.75□□□□□ -0.05
VCAN-211ENST00000513984 C19orf60Q96EN9 201 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 PANX3Q96QZ0 392 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 HPS4Q9NQG7 708 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 RAD18Q9NS91 495 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 DEC1Q9P2X7 70 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 MSRAQ9UJ68 235 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 TMPRSS11EQ9UL52 423 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 DNAJC15Q9Y5T4 150 aa14.75□□□□□ -0.05
VCAN-211ENST00000513984 LOC100653049A0A140TA62 436 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 C16orf96A6NNT2 1141 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 E2F3O00716 465 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 CHUKO15111 745 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 KRT34O76011 436 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 MLYCDO95822 493 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 SLC25A3Q00325 362 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 RALGDSQ12967 914 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 TTLL9Q3SXZ7 439 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 ACSBG2Q5FVE4 666 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 FRA10AC1Q70Z53 315 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 LARP4Q71RC2 724 aaKnown RBP eCLIP14.74□□□□□ -0.05
VCAN-211ENST00000513984 HSD11B1LQ7Z5J1 315 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 SCUBE1Q8IWY4 988 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 ULK2Q8IYT8 1036 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 ZNF366Q8N895 744 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 PDPRQ8NCN5 879 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 PPP2R3CQ969Q6 453 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 FAM126AQ9BYI3 521 aaPredicted RBP14.74□□□□□ -0.05
VCAN-211ENST00000513984 SEMA4BQ9NPR2 832 aaPredicted RBP14.74□□□□□ -0.05
VCAN-211ENST00000513984 THG1LQ9NWX6 298 aaKnown RBP14.74□□□□□ -0.05
VCAN-211ENST00000513984 KCTD5Q9NXV2 234 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 CDH22Q9UJ99 828 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 G3BP2Q9UN86 482 aaKnown RBP14.74□□□□□ -0.05
VCAN-211ENST00000513984 OARD1Q9Y530 152 aa14.74□□□□□ -0.05
VCAN-211ENST00000513984 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.74□□□□□ -0.05
VCAN-211ENST00000513984 EIF3FO00303 357 aaPredicted RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 RAD51BO15315 384 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CBSLP0DN79 551 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 EZRP15311 586 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 ITGAXP20702 1163 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CBSP35520 551 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 MMP12P39900 470 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 FOXA1P55317 472 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 PCBP2Q15366 365 aaKnown RBP eCLIP14.73□□□□□ -0.05
VCAN-211ENST00000513984 FBXO48Q5FWF7 155 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 HENMT1Q5T8I9 393 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 SNX32Q86XE0 403 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 TWIST2Q8WVJ9 160 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 MRPL38Q96DV4 380 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 MARK4Q96L34 752 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 FAM161BQ96MY7 647 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 THTPAQ9BU02 230 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 APOL5Q9BWW9 433 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 SPATA16Q9BXB7 569 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 FAM83DQ9H4H8 585 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 IGFLR1Q9H665 355 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 CD84Q9UIB8 345 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 RANBP2P49792 3224 aaKnown RBP14.73□□□□□ -0.05
VCAN-211ENST00000513984 A0A088AWK7 358 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 A0A1B0GTL3 188 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 EDDM13A0A1B0GTR0 161 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 UBDO15205 165 aa14.73□□□□□ -0.05
VCAN-211ENST00000513984 FFAR2O15552 330 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms