RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ZNF518BQ9C0D4 1074 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 KCTD10Q9H3F6 313 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 MS4A5Q9H3V2 200 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 PNPLA8Q9NP80 782 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CCM2LQ9NUG4 571 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TMEM30AQ9NV96 361 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 DNAJC28Q9NX36 388 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RBAKQ9NYW8 714 aaPredicted RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 DKK3Q9UBP4 350 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 CYTH4Q9UIA0 394 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 SIX4Q9UIU6 781 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 STOML2Q9UJZ1 356 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 AGO1Q9UL18 857 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 TMPRSS11EQ9UL52 423 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 PHTF1Q9UMS5 762 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 NOL7Q9UMY1 257 aaKnown RBP3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 U3KQA8 63 aa3.74□□□□□ -1.81
PDLIM5-218ENST00000513341 RP1P56715 2156 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PDZD2O15018 2839 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 APCP25054 2843 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ESPL1Q14674 2120 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 F8P00451 2351 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 EDDM13A0A1B0GTR0 161 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CPED1A4D0V7 1026 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 KLHL33A6NCF5 533 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF233A6NK53 670 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CLDN5O00501 218 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 NTN3O00634 580 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MID1O15344 667 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PRAMEF4O60810 478 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 SDC3O75056 442 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PHF2O75151 1096 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CSF2P04141 144 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 NNMTP40261 264 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MTNR1BP49286 362 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 NEK2P51955 445 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MAPK10P53779 464 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ADPRHP54922 357 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 LGALS4P56470 323 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ALCAMQ13740 583 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MUM1Q2TAK8 710 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 C10orf120Q5SQS8 335 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 C9orf64Q5T6V5 341 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM46CQ5VWP2 391 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 HIST2H2BCQ6DN03 193 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CAPRIN2Q6IMN6 1127 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 VWA1Q6PCB0 445 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 EFL1Q7Z2Z2 1120 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 TRAPPC11Q7Z392 1133 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 TIPARPQ7Z3E1 657 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CCDC186Q7Z3E2 898 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF572Q7Z3I7 529 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 KCNK18Q7Z418 384 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 UNC93AQ86WB7 457 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 WDR49Q8IV35 697 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CBARPQ8N350 705 aaPredicted RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ARHGAP18Q8N392 663 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 SDR16C5Q8N3Y7 309 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 TEX19Q8NA77 164 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 FIBINQ8TAL6 211 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ZNF480Q8WV37 535 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 HTR3CQ8WXA8 447 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 SORCS1Q8WY21 1168 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 AZIN2Q96A70 460 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ARRDC3Q96B67 414 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 P2RY11Q96G91 374 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 FAXDC2Q96IV6 333 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CDK5RAP3Q96JB5 506 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 TBATAQ96M53 351 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 AK8Q96MA6 479 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ACCSQ96QU6 501 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 IL12RB2Q99665 862 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CMKLR1Q99788 373 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MRPL45Q9BRJ2 306 aaKnown RBP3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 FAM213AQ9BRX8 229 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 MED10Q9BTT4 135 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 EFHD1Q9BUP0 239 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 UBXN6Q9BZV1 441 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 DNAI2Q9GZS0 605 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PDE11AQ9HCR9 933 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PRDM8Q9NQV8 689 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PDRG1Q9NUG6 133 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 OSER1Q9NX31 292 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 DONSONQ9NYP3 566 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 WWOXQ9NZC7 414 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 SEL1LQ9UBV2 794 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 SERGEFQ9UGK8 458 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 GGA2Q9UJY4 613 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 CLEC4EQ9ULY5 219 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 GPR45Q9Y5Y3 372 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 DOCK9Q9BZ29 2069 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 PCNX1Q96RV3 2341 aa3.73□□□□□ -1.81
PDLIM5-218ENST00000513341 ZFC3H1O60293 1989 aaKnown RBP3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SCN8AQ9UQD0 1980 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ITIH6Q6UXX5 1313 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 ABCA2Q9BZC7 2435 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 SPTY2D1-AS1A0A0U1RR47 76 aa3.72□□□□□ -1.81
PDLIM5-218ENST00000513341 HEATR9A2RTY3 570 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms