RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 SNF8Q96H20 258 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 AHCYL2Q96HN2 611 aaKnown RBP7.37□□□□□ -1.23
NR1I3-231ENST00000512340 DEPDC7Q96QD5 511 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 TCF12Q99081 682 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 KRT12Q99456 494 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 AGAP2Q99490 1192 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 GORASP1Q9BQQ3 440 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CCM2Q9BSQ5 444 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 BOCQ9BWV1 1114 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 STRADBQ9C0K7 418 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CLPBQ9H078 707 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CCDC68Q9H2F9 335 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 EPB41L1Q9H4G0 881 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 UGT1A7Q9HAW7 530 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 UGT1A10Q9HAW8 530 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 UGT1A8Q9HAW9 530 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 MRPL40Q9NQ50 206 aaKnown RBP7.37□□□□□ -1.23
NR1I3-231ENST00000512340 KLC4Q9NSK0 619 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CATSPERZQ9NTU4 200 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 ZDHHC3Q9NYG2 299 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 SIRPGQ9P1W8 387 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 ATXN10Q9UBB4 475 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CDC23Q9UJX2 597 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 ACSL5Q9ULC5 683 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 CNOT6Q9ULM6 557 aaKnown RBP7.37□□□□□ -1.23
NR1I3-231ENST00000512340 HEBP2Q9Y5Z4 205 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 MAD1L1Q9Y6D9 718 aa7.37□□□□□ -1.23
NR1I3-231ENST00000512340 ASPMQ8IZT6 3477 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 COL5A1P20908 1838 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 ZFYVE26Q68DK2 2539 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 C17orf113A0A1B0GUU1 675 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 FAM237BA0A1B0GVD1 139 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CTAGE15A4D2H0 777 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 H3BMM5 538 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 IFRD1O00458 451 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 GIPC1O14908 333 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 DNAJC6O75061 913 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 POP7O75817 140 aaKnown RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 VIPP01282 170 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SLC35G4P0C7Q5 338 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 F3P13726 295 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 ACRV1P26436 265 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 MGAT1P26572 445 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 POLD2P49005 469 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 ACADVLP49748 655 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 FOXC1Q12948 553 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SPIDRQ14159 915 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 KCNJ11Q14654 390 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 BCL7AQ4VC05 210 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SYTL3Q4VX76 610 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CCDC38Q502W7 563 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 TPRG1LQ5T0D9 272 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 FNBP1LQ5T0N5 605 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SWT1Q5T5J6 900 aaKnown RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 KLHL35Q6PF15 583 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 OGFOD3Q6PK18 319 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 TMEM220Q6QAJ8 160 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 WASH2PQ6VEQ5 465 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 NYAP1Q6ZVC0 841 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CTAGE6Q86UF2 777 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 JAMLQ86YT9 394 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CACTIN-AS1Q8N1I8 211 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CEP112Q8N8E3 955 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 GLIS1Q8NBF1 620 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SPATA4Q8NEY3 305 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 OR13C4Q8NGS5 318 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 OR10G6Q8NH81 332 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CPT1BQ92523 772 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 HDAC10Q969S8 669 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 STAMBPL1Q96FJ0 436 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 PANX3Q96QZ0 392 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 FAM167BQ9BTA0 163 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 KIFC1Q9BW19 673 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 FOXP3Q9BZS1 431 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 TCEAL2Q9H3H9 227 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SYNDIG1Q9H7V2 258 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 WASH6PQ9NQA3 447 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CHRAC1Q9NRG0 131 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 PIH1D1Q9NWS0 290 aaKnown RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SMARCAL1Q9NZC9 954 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 LRIT1Q9P2V4 623 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 SOX13Q9UN79 622 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 KCTD3Q9Y597 815 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 COLEC10Q9Y6Z7 277 aa7.36□□□□□ -1.23
NR1I3-231ENST00000512340 ARHGEF17Q96PE2 2063 aaPredicted RBP7.36□□□□□ -1.23
NR1I3-231ENST00000512340 CCDC78A2IDD5 438 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 CCDC162PA2VCL2 907 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 MGAT4DA6NG13 374 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 OR2AG2A6NM03 316 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 AGAP14A8MT82 685 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 CD3EAPO15446 510 aaKnown RBP7.35□□□□□ -1.23
NR1I3-231ENST00000512340 MAP3K7O43318 606 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 COQ9O75208 318 aa7.35□□□□□ -1.23
NR1I3-231ENST00000512340 MTX2O75431 263 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms