RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 IRGCQ6NXR0 463 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 RPUSD3Q6P087 351 aaKnown RBP9.37□□□□□ -0.91
PTPN20-221ENST00000509599 SHC4Q6S5L8 630 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 HSD11B1LQ7Z5J1 315 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 PHLDB2Q86SQ0 1253 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 WDTC1Q8N5D0 677 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 IP6K3Q96PC2 410 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 GBP5Q96PP8 586 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
PTPN20-221ENST00000509599 LIME1Q9H400 295 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 TMEM248Q9NWD8 314 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 ZDHHC3Q9NYG2 299 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 NEU3Q9UQ49 428 aa9.37□□□□□ -0.91
PTPN20-221ENST00000509599 CHD3Q12873 2000 aaKnown RBP9.37□□□□□ -0.91
PTPN20-221ENST00000509599 OR5K4A6NMS3 321 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 DNAJC6O75061 913 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 KLF7O75840 302 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 LETM1O95202 739 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ERBB2P04626 1255 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 SLC2A4P14672 509 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 YBX1P67809 324 aaKnown RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 GPR19Q15760 415 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 C3AR1Q16581 482 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ZCWPW2Q504Y3 356 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 TCERG1LQ5VWI1 586 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 DENND2CQ68D51 928 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 C11orf57Q6ZUT1 292 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 Q6ZVL8 140 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 NCCRP1Q6ZVX7 275 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 CHST15Q7LFX5 561 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 PHC2Q8IXK0 858 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 Q8N3U1 123 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 AVL9Q8NBF6 648 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 CATSPER1Q8NEC5 780 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ZNF397Q8NF99 534 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ZNF606Q8WXB4 792 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 UBXN4Q92575 508 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ZDHHC12Q96GR4 267 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 NT5C1BQ96P26 610 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ACP6Q9NPH0 428 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 P4HTMQ9NXG6 502 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 SCHIP1Q9P0W5 487 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 ZNF624Q9P2J8 865 aaPredicted RBP9.36□□□□□ -0.91
PTPN20-221ENST00000509599 TINAGQ9UJW2 476 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
PTPN20-221ENST00000509599 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM72CH0Y354 149 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 HEXIM1O94992 359 aaKnown RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ESRRAP11474 423 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ACP5P13686 325 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 XRCC1P18887 633 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 MST1P26927 711 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 SERPINA4P29622 427 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 GPR1P46091 355 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 TUBB4BP68371 445 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 SLC6A3Q01959 620 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 TUBB2AQ13885 445 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 PTCHD3Q3KNS1 767 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM72AQ5TYM5 149 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM72DQ6L9T8 149 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ADAMTSL4Q6UY14 1074 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 RFLNAQ6ZTI6 216 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 RRAGAQ7L523 313 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM72BQ86X60 149 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ZNF354CQ86Y25 554 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 SYTL1Q8IYJ3 562 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ZNF501Q96CX3 271 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 MAGEB10Q96LZ2 347 aaPredicted RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 NSMCE3Q96MG7 304 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ALPK1Q96QP1 1244 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 TUBB2BQ9BVA1 445 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 RAB33BQ9H082 229 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ATP13A3Q9H7F0 1226 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 METTL14Q9HCE5 456 aaKnown RBP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 KCTD5Q9NXV2 234 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPN20-221ENST00000509599 ST6GALNAC2Q9UJ37 374 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 STAP1Q9ULZ2 295 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 CUBNO60494 3623 aa9.35□□□□□ -0.91
PTPN20-221ENST00000509599 PEX12O00623 359 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms