RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 CAVIN4Q5BKX8 364 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 XKR9Q5GH70 373 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 SPSB3Q6PJ21 355 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 SHFQ7M4L6 423 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 TMTC1Q8IUR5 882 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 KIAA2013Q8IYS2 634 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 PARP16Q8N5Y8 322 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 NSUN4Q96CB9 384 aaKnown RBP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 ZBTB10Q96DT7 871 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 SCMH1Q96GD3 660 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 FUZQ9BT04 418 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 IDI2Q9BXS1 227 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 GPR63Q9BZJ6 419 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 LRRCC1Q9C099 1032 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 PIH1D3Q9NQM4 214 aaKnown RBP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 SNTG1Q9NSN8 517 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 BEX4Q9NWD9 120 aaPredicted RBP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 IL1RAPL1Q9NZN1 696 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 HSPB7Q9UBY9 170 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 MYH8P13535 1937 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 BAZ2AQ9UIF9 1905 aaKnown RBP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 TTC41PQ6P2S7 1318 aa4.12□□□□□ -1.75
NFKB1-208ENST00000509165 COL4A4P53420 1690 aaPredicted RBP4.12□□□□□ -1.75
NFKB1-208ENST00000509165 TAF4O00268 1085 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 MTA2O94776 668 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 POLBP06746 335 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 PCNAP12004 261 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 CNTFP26441 200 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 CHATP28329 748 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 VCPP55072 806 aaKnown RBP4.11□□□□□ -1.75
NFKB1-208ENST00000509165 CDH15P55291 814 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 HDAC4P56524 1084 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 MECOMQ03112 1051 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 RUNX2Q13950 521 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 EFNB3Q15768 340 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 NFIL3Q16649 462 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 ADGRA1Q86SQ6 560 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 TADA2BQ86TJ2 420 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 NOXA1Q86UR1 476 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 AACSQ86V21 672 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 TRPV1Q8NER1 839 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 SPATA3Q8NHX4 192 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 DOCK7Q96N67 2140 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 SCLT1Q96NL6 688 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 DUX5Q96PT3 197 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 SLITRK1Q96PX8 696 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 PKP4Q99569 1192 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 RIOK1Q9BRS2 568 aaKnown RBP4.11□□□□□ -1.75
NFKB1-208ENST00000509165 INTS2Q9H0H0 1204 aaKnown RBP4.11□□□□□ -1.75
NFKB1-208ENST00000509165 IL1RAPL2Q9NP60 686 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 DDX4Q9NQI0 724 aaKnown RBP4.11□□□□□ -1.75
NFKB1-208ENST00000509165 ECHDC1Q9NTX5 307 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 HCN3Q9P1Z3 774 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 KCNG2Q9UJ96 466 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 NFS1Q9Y697 457 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 MROH7-TTC4A0A0A0MT08 1334 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 ITPR1Q14643 2758 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 CNOT1A5YKK6 2376 aaKnown RBP4.11□□□□□ -1.75
NFKB1-208ENST00000509165 ZNF462Q96JM2 2506 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 SCN5AQ14524 2016 aa4.11□□□□□ -1.75
NFKB1-208ENST00000509165 PTPN13Q12923 2485 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 PLSCR5A0PG75 271 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 IFNL4K9M1U5 179 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 DNM1LO00429 736 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GUCY1B2O75343 617 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 ENTPD3O75355 529 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE7O76087 117 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 NDUFB4O95168 129 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 AFPP02771 609 aaKnown RBP4.1□□□□□ -1.75
NFKB1-208ENST00000509165 SNRNP70P08621 437 aaKnown RBP4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE12FP0CL80 117 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE12GP0CL81 117 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE12IP0CL82 117 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 VAMP2P63027 116 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 POU3F1Q03052 451 aaPredicted RBP4.1□□□□□ -1.75
NFKB1-208ENST00000509165 POU5F1BQ06416 359 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GRIK3Q13003 919 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE1Q13065 139 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GAGE4Q13068 117 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 SF3B4Q15427 424 aaKnown RBP eCLIP4.1□□□□□ -1.75
NFKB1-208ENST00000509165 TAF11Q15544 211 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 TAF12Q16514 161 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 CCDC158Q5M9N0 1113 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 LRRC8EQ6NSJ5 796 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 CDC42EP5Q6NZY7 148 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 TMEM81Q6P7N7 255 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 RHBDF2Q6PJF5 856 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 DGLUCYQ7Z3D6 616 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 GPAT4Q86UL3 456 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 C11orf65Q8NCR3 313 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 USP6NLQ92738 828 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 TEKT1Q969V4 418 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 MTBPQ96DY7 904 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 MXRA8Q9BRK3 442 aa4.1□□□□□ -1.75
NFKB1-208ENST00000509165 SMYD2Q9NRG4 433 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms