RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SLC27A1Q6PCB7 646 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 SEPT14Q6ZU15 432 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 PLEKHM3Q6ZWE6 761 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 DGLUCYQ7Z3D6 616 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 DIS3L2Q8IYB7 885 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 LITAFQ99732 161 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 SIL1Q9H173 461 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 PDZD7Q9H5P4 517 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 UPF2Q9HAU5 1272 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 MAP3K20Q9NYL2 800 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 UBA2Q9UBT2 640 aaPredicted RBP4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 TMEM98Q9Y2Y6 226 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 PLCH2O75038 1416 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 BAG4O95429 457 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 ICAM1P05362 532 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 SPARCP09486 303 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 CSF2RAP15509 400 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 CCR9P51686 369 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 MRPS34P82930 218 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 ZBED6P86452 979 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 TBCEQ15813 527 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 C14orf177Q52M58 125 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 RAB6CQ53S08 254 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 INTS11Q5TA45 600 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 ARHGAP11AQ6P4F7 1023 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 PIWIL4Q7Z3Z4 852 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 SDCCAG8Q86SQ7 713 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 CNBD1Q8NA66 436 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 KCNG4Q8TDN1 519 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 UTP15Q8TED0 518 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 LGALS12Q96DT0 336 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 WBP1Q96G27 269 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 EGLN2Q96KS0 407 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 WDFY2Q96P53 400 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 SMC6Q96SB8 1091 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 RAB6CQ9H0N0 254 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 CWC15Q9P013 229 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF624Q9P2J8 865 aaPredicted RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 LRP6O75581 1613 aa4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 DNMT1P26358 1616 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 RNF17Q9BXT8 1623 aaKnown RBP4.93□□□□□ -1.62
TOPBP1-206ENST00000508524 CDK13Q14004 1512 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SNED1Q8TER0 1413 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 KANSL1LA0AUZ9 987 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 EIF4E1BA6NMX2 242 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SLC25A12O75746 678 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 PDE9AO76083 593 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 LDLRP01130 860 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SERPINB2P05120 415 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 CLEC3BP05452 202 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 PRCPP42785 496 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 ACVR2BQ13705 512 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 PDE1CQ14123 709 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 FCN2Q15485 313 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 ADIPOQQ15848 244 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 LRIF1Q5T3J3 769 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 ETNPPLQ8TBG4 499 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 HM13Q8TCT9 377 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 TAS1R2Q8TE23 839 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 TM9SF4Q92544 642 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SEC62Q99442 399 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SEPT5Q99719 369 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 MTMR10Q9NXD2 777 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 FBXW11Q9UKB1 542 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF518AQ6AHZ1 1483 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 MROH2AA6NES4 1674 aa4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 POLR1AO95602 1720 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-206ENST00000508524 SAMD9Q5K651 1589 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 CNTLNQ9NXG0 1405 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 BLOC1S5-TXNDC5H3BN57 136 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 HCRTR2O43614 444 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 TAS2R40P59535 323 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 PPIGQ13427 754 aaKnown RBP eCLIP4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 TSTQ16762 297 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 SFMBT2Q5VUG0 894 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 PLXDC2Q6UX71 529 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 ANO5Q75V66 913 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 PM20D2Q8IYS1 436 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 RASGEF1CQ8N431 466 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 SLC38A9Q8NBW4 561 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 FCAMRQ8WWV6 532 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 RFFLQ8WZ73 363 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 STAMBPL1Q96FJ0 436 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 ABHD8Q96I13 439 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 GFRA4Q9GZZ7 299 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 LIMA1Q9UHB6 759 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 TMEM184BQ9Y519 407 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 KCNE2Q9Y6J6 123 aa4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 SUPT6HQ7KZ85 1726 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-206ENST00000508524 SMCHD1A6NHR9 2005 aa4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 XIRP1Q702N8 1843 aaKnown RBP4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 PRAG1Q86YV5 1406 aa4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 CLTCQ00610 1675 aaKnown RBP4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 A2ML1A8K2U0 1454 aa4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 MLH3Q9UHC1 1453 aa4.9□□□□□ -1.62
TOPBP1-206ENST00000508524 A0A1W2PPI3 338 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 SMIM1B2RUZ4 78 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 ANKRD66B4E2M5 251 aa4.9□□□□□ -1.63
TOPBP1-206ENST00000508524 MCCP23508 829 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms