RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 GTPBP10A4D1E9 387 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TRIM64A6NGJ6 449 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TRIM64BA6NI03 449 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 AGAP14A8MT82 685 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 WDR46O15213 610 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 WDR1O75083 606 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ERAL1O75616 437 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 LDLRP01130 860 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 EGFP01133 1207 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 CLTBP09497 229 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ATP6V1E1P36543 226 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TNNT3P45378 269 aaPredicted RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 HARS2P49590 506 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 CTCFP49711 727 aaPredicted RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ERVK11-1P61568 191 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 NEXNQ0ZGT2 675 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 BFSP1Q12934 665 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 GTF2H2Q13888 395 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 COG2Q14746 738 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 NTRK2Q16620 822 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 C1orf141Q5JVX7 400 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 SIRPB2Q5JXA9 342 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 KRT80Q6KB66 452 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 GTF2H2CQ6P1K8 395 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 NCEH1Q6PIU2 408 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ASB18Q6ZVZ8 466 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 GSTA5Q7RTV2 222 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ADGRA1Q86SQ6 560 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TICAM1Q8IUC6 712 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TMCO5AQ8N6Q1 288 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 PCDH20Q8N6Y1 951 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ZNF713Q8N859 430 aaPredicted RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ARHGEF2Q92974 986 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 FAM149B1Q96BN6 582 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 KLHL29Q96CT2 875 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 ORAI1Q96D31 301 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 CCDC43Q96MW1 224 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 NR1H4Q96RI1 486 aaPredicted RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 FAM110AQ9BQ89 295 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 SYT17Q9BSW7 474 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 LRRC1Q9BTT6 524 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 POLR3CQ9BUI4 534 aaPredicted RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 FTOQ9C0B1 505 aaKnown RBP eCLIP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 XAB2Q9HCS7 855 aaKnown RBP3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 GIMAP4Q9NUV9 329 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 TAB2Q9NYJ8 693 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 SARDHQ9UL12 918 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 KCNE2Q9Y6J6 123 aa3.66□□□□□ -1.82
CBX3P3-201ENST00000508108 LIPT2A6NK58 231 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 SH2B2O14492 632 aaPredicted RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 LDLRAD4O15165 306 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 FTCDO95954 541 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 EIF2S1P05198 315 aaKnown RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 STMN1P16949 149 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 PSMA3P25788 255 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 GCH1P30793 250 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 ACSL1P33121 698 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 GABRB2P47870 512 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CLK1P49759 484 aaKnown RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 RBP5P82980 135 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 FOXM1Q08050 763 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CCDC6Q16204 474 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 COL28A1Q2UY09 1125 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 C14orf177Q52M58 125 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 RAPH1Q70E73 1250 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CCDC186Q7Z3E2 898 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 SLFN11Q7Z7L1 901 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 OR8H3Q8N146 312 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 WDSUB1Q8N9V3 476 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 KCTD6Q8NC69 237 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CTCFLQ8NI51 663 aaPredicted RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 PIGTQ969N2 578 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 SLC41A2Q96JW4 573 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 JAKMIP1Q96N16 626 aaKnown RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 GBP5Q96PP8 586 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 IFIH1Q9BYX4 1025 aaKnown RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 SLC25A18Q9H1K4 315 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 FKRPQ9H9S5 495 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CPSF2Q9P2I0 782 aaKnown RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CORO1CQ9ULV4 474 aaPredicted RBP3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 MTMR6Q9Y217 621 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
CBX3P3-201ENST00000508108 LOC100509620A0A075B734 347 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 ANTXRLA6NF34 631 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 NPIPB15A6NHN6 443 aaPredicted RBP3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 PMS2P5A8MQ11 134 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 PI4K2BG5E9Z4 385 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 H0Y626 953 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 VCYO14598 125 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 HTATSF1O43719 755 aaKnown RBP3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 POLR2CP19387 275 aaPredicted RBP3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 TM4SF1P30408 202 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 MAPK4P31152 587 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 KRT2P35908 639 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 RGS2P41220 211 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 CAPZA2P47755 286 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 AMPHP49418 695 aa3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 CSNK2A1P68400 391 aaPredicted RBP3.64□□□□□ -1.83
CBX3P3-201ENST00000508108 ZNF234Q14588 700 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms