RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DNAAF2Q9NVR5 837 aaKnown RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 NINJ2Q9NZG7 142 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 MARCH4Q9P2E8 410 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 MYLKQ15746 1914 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 MUC6Q6W4X9 2439 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 C17orf113A0A1B0GUU1 675 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 TCRBV9S1A1TA0A576 114 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 PCDHGA12O60330 932 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 GFRA3O60609 400 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 PIAS2O75928 621 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 ANXA6P08133 673 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 SLC2A4P14672 509 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 LEPRP48357 1165 aaKnown RBP19.79■□□□□ 0.76
USP53-203ENST00000507597 PRLHRP49683 370 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 CLCNKAP51800 687 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 CTBP1Q13363 440 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 KLHL38Q2WGJ6 581 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 ZNF542PQ5EBM4 170 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 ZNF648Q5T619 568 aaPredicted RBP19.79■□□□□ 0.76
USP53-203ENST00000507597 DET1Q7L5Y6 550 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 ASCL5Q7RTU5 278 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 TAF8Q7Z7C8 310 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 CTAGE3PQ8IX95 158 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 BEND7Q8N7W2 519 aaPredicted RBP19.79■□□□□ 0.76
USP53-203ENST00000507597 LMX1AQ8TE12 382 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 FBF1Q8TES7 1133 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 GLMNQ92990 594 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 SGF29Q96ES7 293 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 PDXPQ96GD0 296 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 CCM2Q9BSQ5 444 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 EVA1BQ9NVM1 165 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 IL1RAPL1Q9NZN1 696 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 RAB21Q9UL25 225 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 IKBKGQ9Y6K9 419 aa19.79■□□□□ 0.76
USP53-203ENST00000507597 OR2AG2A6NM03 316 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 E5RI56 91 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 POP7O75817 140 aaKnown RBP19.78■□□□□ 0.76
USP53-203ENST00000507597 ACSL3O95573 720 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 S1PR4O95977 384 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 ABHD2P08910 425 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 PRSS56P0CW18 603 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 EPHA8P29322 1005 aaPredicted RBP19.78■□□□□ 0.76
USP53-203ENST00000507597 SLC1A2P43004 574 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 CD151P48509 253 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 EIF3BP55884 814 aaKnown RBP19.78■□□□□ 0.76
USP53-203ENST00000507597 GPX6P59796 221 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 SEMA3AQ14563 771 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 TCEAL6Q6IPX3 200 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 UGT3A1Q6NUS8 523 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 TRMT10BQ6PF06 316 aaKnown RBP19.78■□□□□ 0.76
USP53-203ENST00000507597 CRTC3Q6UUV7 619 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 TCEAL3Q969E4 200 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 CPNE1Q99829 537 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 BOCQ9BWV1 1114 aa19.78■□□□□ 0.76
USP53-203ENST00000507597 MGAT4DA6NG13 374 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 FAM159BA6NKW6 160 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 TPP1O14773 563 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 PKMP14618 531 aaKnown RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 IDSP22304 550 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 DGKAP23743 735 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 CSE1LP55060 971 aaKnown RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 ARHGAP8P85298 464 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 B4GALNT1Q00973 533 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 KHDC1Q4VXA5 237 aaKnown RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 PRAMEF14Q5SWL7 426 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 LDB1Q86U70 411 aaPredicted RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 DENND6AQ8IWF6 608 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 DCLK2Q8N568 766 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 ZNF548Q8NEK5 533 aaPredicted RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 OR2L2Q8NH16 312 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 HM13Q8TCT9 377 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 GPBAR1Q8TDU6 330 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 LPGAT1Q92604 370 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 FUT8Q9BYC5 575 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 TMEM168Q9H0V1 697 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 FSCN3Q9NQT6 498 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 FBXO6Q9NRD1 293 aaPredicted RBP19.77■□□□□ 0.76
USP53-203ENST00000507597 NCKIPSDQ9NZQ3 722 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 ACSL5Q9ULC5 683 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 CRYL1Q9Y2S2 319 aa19.77■□□□□ 0.76
USP53-203ENST00000507597 LMO7DNF2Z398 122 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 SCAMP1O15126 338 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 FAM153BP0C7A2 387 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 ACP5P13686 325 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 CHRM3P20309 590 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 FMO4P31512 558 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 CA5AP35218 305 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 SPRP35270 261 aaPredicted RBP19.76■□□□□ 0.75
USP53-203ENST00000507597 ACTR1BP42025 376 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 CTSCP53634 463 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 ACTR1AP61163 376 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 CTBSQ01459 385 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 TMED2Q15363 201 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 SMAD1Q15797 465 aaKnown RBP19.76■□□□□ 0.75
USP53-203ENST00000507597 FAM153CQ494X1 144 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 GRTP1Q5TC63 336 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 TAOK1Q7L7X3 1001 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 STRA8Q7Z7C7 330 aa19.76■□□□□ 0.75
USP53-203ENST00000507597 UNC5BQ8IZJ1 945 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms