RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 CACHD1Q5VU97 1274 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 IRGCQ6NXR0 463 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 WASH2PQ6VEQ5 465 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 FAM92BQ6ZTR7 304 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 C11orf96Q7Z7L8 435 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 TRAPPC5Q8IUR0 188 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 GDAP1Q8TB36 358 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 KLHL6Q8WZ60 621 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 CXorf40BQ96DE9 158 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 CHP1Q99653 195 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 ZNF768Q9H5H4 540 aaKnown RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 IL26Q9NPH9 171 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 WASH6PQ9NQA3 447 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 POT1Q9NUX5 634 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 SAE1Q9UBE0 346 aaPredicted RBP11.17□□□□□ -0.62
SIL1-208ENST00000505945 HYOU1Q9Y4L1 999 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
SIL1-208ENST00000505945 A0A0A6YYK5 440 aaPredicted RBP11.16□□□□□ -0.62
SIL1-208ENST00000505945 SSU72P8A0A1W2PR75 194 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 K7EM74 188 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A9O60656 530 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 SPAG6O75602 509 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A6P19224 532 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 NR1D1P20393 614 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A1P22309 533 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A4P22310 534 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 PTPN3P26045 913 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 CHRNA4P43681 627 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 CAPZBP47756 277 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 PPP1CAP62136 330 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 LLGL1Q15334 1064 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 SLC14A2Q15849 920 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 LACTB2Q53H82 288 aaPredicted RBP11.16□□□□□ -0.62
SIL1-208ENST00000505945 ODF2Q5BJF6 829 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 MFSD7Q6UXD7 560 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 TMEM135Q86UB9 458 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 VSIG1Q86XK7 387 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 STAMBPL1Q96FJ0 436 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 ZDHHC12Q96GR4 267 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 TTC25Q96NG3 672 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 VPS35Q96QK1 796 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 SRPK1Q96SB4 655 aaKnown RBP11.16□□□□□ -0.62
SIL1-208ENST00000505945 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A7Q9HAW7 530 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A10Q9HAW8 530 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 UGT1A8Q9HAW9 530 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 SPTLC3Q9NUV7 552 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 LNPEPQ9UIQ6 1025 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 TP53TG5Q9Y2B4 290 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 KCTD3Q9Y597 815 aa11.16□□□□□ -0.62
SIL1-208ENST00000505945 RP1L1Q8IWN7 2480 aaPredicted RBP11.16□□□□□ -0.62
SIL1-208ENST00000505945 ZNF106Q9H2Y7 1883 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 USP9YO00507 2555 aaPredicted RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 F5H423 210 aaPredicted RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 GPR39O43194 453 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 BUD23O43709 281 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 POP7O75817 140 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 TIAF1O95411 115 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 FGF5P12034 268 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 VCLP18206 1134 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 NELFEP18615 380 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 CD68P34810 354 aaPredicted RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 CA5AP35218 305 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 HMGCLP35914 325 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 HALP42357 657 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 WNT3AP56704 352 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 GTF2H3Q13889 308 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 UBAP2LQ14157 1087 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 KCNAB1Q14722 419 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 CHRNA6Q15825 494 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 SIRPB2Q5JXA9 342 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 LRRC38Q5VT99 294 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 KDELC1Q6UW63 502 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PRSS42Q7Z5A4 293 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 AMZ2Q86W34 360 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PPP1R3BQ86XI6 285 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 RHOT1Q8IXI2 618 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 RBM12BQ8IXT5 1001 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 TTC30BQ8N4P2 665 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 SLC25A41Q8N5S1 370 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 RASGEF1AQ8N9B8 481 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 BRSK1Q8TDC3 778 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 RAB33BQ9H082 229 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 ZNHIT6Q9NWK9 470 aaKnown RBP11.15□□□□□ -0.62
SIL1-208ENST00000505945 EPHA6Q9UF33 1036 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 FAM153AQ9UHL3 310 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PADI1Q9ULC6 663 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PSMD13Q9UNM6 376 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 PLAAQ9Y263 795 aa11.15□□□□□ -0.62
SIL1-208ENST00000505945 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.63
SIL1-208ENST00000505945 IGHV5-51A0A0C4DH38 117 aa11.14□□□□□ -0.63
SIL1-208ENST00000505945 PIPSLA2A3N6 862 aa11.14□□□□□ -0.63
SIL1-208ENST00000505945 CDC14CA4D256 554 aa11.14□□□□□ -0.63
SIL1-208ENST00000505945 GOLGA6L3A6NEY3 463 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms