RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 RTP4Q96DX8 246 aa22.28■■□□□ 1.16
CDC42SE2-207ENST00000504701 PANX2Q96RD6 677 aa22.28■■□□□ 1.16
CDC42SE2-207ENST00000504701 GBA3Q9H227 469 aa22.28■■□□□ 1.16
CDC42SE2-207ENST00000504701 PCDHA3Q9Y5H8 950 aa22.28■■□□□ 1.16
CDC42SE2-207ENST00000504701 HELZ2Q9BYK8 2649 aaKnown RBP22.28■■□□□ 1.16
CDC42SE2-207ENST00000504701 OR5K4A6NMS3 321 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 PJA2O43164 708 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 VIPP01282 170 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 EPOP01588 193 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 XRCC1P18887 633 aaPredicted RBP22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 PSMB4P28070 264 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 LEPRP48357 1165 aaKnown RBP22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 MC2RQ01718 297 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 MPP3Q13368 585 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 TIPARPQ7Z3E1 657 aaKnown RBP22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 GAS2L3Q86XJ1 694 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 GPR150Q8NGU9 434 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 RSC1A1Q92681 617 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 MED8Q96G25 268 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 VAT1Q99536 393 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 TRABDQ9H4I3 376 aa22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 MN1Q10571 1320 aaPredicted RBP22.27■■□□□ 1.16
CDC42SE2-207ENST00000504701 GRID2IPA4D2P6 1211 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 OR2AG2A6NM03 316 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 RAD1O60671 282 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 FAM87AP0C7U9 286 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 HLA-DPA1P20036 260 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 PBLDP30039 288 aaPredicted RBP22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 PPP1CAP62136 330 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 TBR1Q16650 682 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 DCAF12Q5T6F0 453 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 GPRC6AQ5T6X5 926 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 CCDC181Q5TID7 509 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 TRIM48Q8IWZ4 208 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 UNC5BQ8IZJ1 945 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 CACNA2D3Q8IZS8 1091 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 BEND7Q8N7W2 519 aaPredicted RBP22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 CCDC112Q8NEF3 446 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 MRFAP1L1Q96HT8 127 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 TGM7Q96PF1 710 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 SRPK1Q96SB4 655 aaKnown RBP22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 FSD1LQ9BXM9 530 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 OSBPL8Q9BZF1 889 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 SPRY4Q9C004 299 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 PILRAQ9UKJ1 303 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 PSMD13Q9UNM6 376 aa22.26■■□□□ 1.15
CDC42SE2-207ENST00000504701 GLYATL1P3A0A0U1RQE8 302 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 KIF1CO43896 1103 aaKnown RBP22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 UBXN7O94888 489 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 PYGMP11217 842 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 ADRA1AP35348 466 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 NAP1L1P55209 391 aaKnown RBP22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 EIF3EP60228 445 aaKnown RBP22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 NFKB2Q00653 900 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 XRCC4Q13426 336 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 GPR18Q14330 331 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 ABRAXAS1Q6UWZ7 409 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 DET1Q7L5Y6 550 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 IL22RA1Q8N6P7 574 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 LRRC57Q8N9N7 239 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 CCDC110Q8TBZ0 833 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 SLC12A9Q9BXP2 914 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 SIDT1Q9NXL6 827 aaKnown RBP22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 TRHDEQ9UKU6 1024 aa22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 PACSIN2Q9UNF0 486 aaPredicted RBP22.25■■□□□ 1.15
CDC42SE2-207ENST00000504701 KCNN4O15554 427 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 POP7O75817 140 aaKnown RBP22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 C9P02748 559 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 CTNNA2P26232 953 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 SEPHS1P49903 392 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 ATP1A2P50993 1020 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 SH3BP2P78314 561 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 GTF2H3Q13889 308 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 NFE2L1Q14494 772 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 SPARCL1Q14515 664 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 ANKRD20A2Q5SQ80 823 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 ANKRD20A1Q5TYW2 823 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 ANKRD20A3Q5VUR7 823 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 TMEM220Q6QAJ8 160 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 XKR5Q6UX68 686 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 TMTC1Q8IUR5 882 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 DDHD1Q8NEL9 900 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 C9orf72Q96LT7 481 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 UCK1Q9HA47 277 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 SLC40A1Q9NP59 571 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 HACD3Q9P035 362 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 FKBPLQ9UIM3 349 aa22.24■■□□□ 1.15
CDC42SE2-207ENST00000504701 LOC101059948A0A1B0GTJ6 334 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 CCL22O00626 93 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 CAPN5O15484 640 aaPredicted RBP22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 RBP3P10745 1247 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 AMD1P17707 334 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 IDSP22304 550 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 TNNT3P45378 269 aaPredicted RBP22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 GEMP55040 296 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 RAB15P59190 212 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 COPS2P61201 443 aa22.23■■□□□ 1.15
CDC42SE2-207ENST00000504701 MSLNQ13421 630 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms