RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 C16orf86Q6ZW13 317 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 AMIGO2Q86SJ2 522 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 UNC45BQ8IWX7 931 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SCUBE3Q8IX30 993 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NRSN1Q8IZ57 195 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC22A15Q8IZD6 547 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 THEM5Q8N1Q8 247 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MPP5Q8N3R9 675 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZCCHC7Q8N3Z6 543 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SPATA6LQ8N4H0 392 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF614Q8N883 585 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 B3GALNT2Q8NCR0 500 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SIMC1Q8NDZ2 872 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PIK3C3Q8NEB9 887 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CATSPER1Q8NEC5 780 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GSTCDQ8NEC7 633 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 URGCPQ8TCY9 931 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 KBTBD7Q8WVZ9 684 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 EDEM1Q92611 657 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 LENG8Q96PV6 779 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 C12orf57Q99622 126 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 DUSP26Q9BV47 211 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 STRA6Q9BX79 667 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 REXO4Q9GZR2 422 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 C6orf62Q9GZU0 229 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NAA50Q9GZZ1 169 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ABCG8Q9H221 673 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RSAD1Q9HA92 442 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNK13Q9HB14 408 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CDHR5Q9HBB8 845 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TRIM39Q9HCM9 518 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TUFT1Q9NNX1 390 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RRN3Q9NYV6 651 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MBD1Q9UIS9 605 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZMYM5Q9UJ78 669 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 FEM1BQ9UK73 627 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CNOT6Q9ULM6 557 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 USP22Q9UPT9 525 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GNEQ9Y223 722 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GVINP1Q7Z2Y8 2422 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GREB1LQ9C091 1923 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM95CA0A1B0GW59 222 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 OR6C74A6NCV1 312 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 H3BMQ9 156 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CNTN5O94779 1100 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CPSF4O95639 269 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CRHP06850 196 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RPL10P27635 214 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PIK3R1P27986 724 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ADRA1BP35368 520 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GPD2P43304 727 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NPTX2P47972 431 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNJ5P48544 419 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NAGLUP54802 743 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CDH4P55283 916 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PTENP60484 403 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNJ10P78508 379 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM189BP81408 668 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RBP5P82980 135 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CUL2Q13617 745 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NFYCQ13952 458 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 DLG2Q15700 870 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CBWD6Q4V339 395 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CBWD3Q5JTY5 395 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TBCELQ5QJ74 424 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CBWD5Q5RIA9 395 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 INTS11Q5TA45 600 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SEL1L3Q68CR1 1132 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ARHGAP17Q68EM7 881 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC9A4Q6AI14 798 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SCARA3Q6AZY7 606 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 EFCAB12Q6NXP0 572 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 PKN3Q6P5Z2 889 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM180AQ6UWF9 173 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ANKS1BQ7Z6G8 1248 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 SH3RF1Q7Z6J0 888 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ARPINQ7Z6K5 226 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ABI3BPQ7Z7G0 1075 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 HORMAD1Q86X24 394 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ATG16L2Q8NAA4 619 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF248Q8NDW4 579 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 FAM172AQ8WUF8 416 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 C10orf82Q8WW14 230 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 METTL21AQ8WXB1 218 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CLPTM1LQ96KA5 538 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TEKT5Q96M29 485 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 RNF145Q96MT1 663 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 OR52B2Q96RD2 323 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 OLFM1Q99784 485 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GAL3ST1Q99999 423 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 CCM2Q9BSQ5 444 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MECRQ9BV79 373 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 TRIM54Q9BYV2 358 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 GCOM2Q9BZD3 368 aaPredicted RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ZCCHC2Q9C0B9 1178 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 NIF3L1Q9GZT8 377 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 EML4Q9HC35 981 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 MAGEE1Q9HCI5 957 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 ANKEF1Q9NU02 776 aa3.64□□□□□ -1.83
PCDH11X-208ENST00000504220 OLAHQ9NV23 265 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms