RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SNX2O60749 519 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 TRIM16O95361 564 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 CYP2A6P11509 494 aaPredicted RBP21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 VIPR1P32241 457 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 PBX2P40425 430 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 RGS4P49798 205 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 ZBTB2Q8N680 514 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 BPIFB1Q8TDL5 484 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 ULK4Q96C45 1275 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 LRIG1Q96JA1 1093 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 SPATS2LQ9NUQ6 558 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 GEMIN8Q9NWZ8 242 aaKnown RBP21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 TMPRSS11EQ9UL52 423 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 TRANK1O15050 2925 aa21.07■□□□□ 0.96
UBE2D3-216ENST00000503742 UBDO15205 165 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 CCNT2O60583 730 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 TULP3O75386 442 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 EZRP15311 586 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 TIMP2P16035 220 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 DGKAP23743 735 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 B4GALNT1Q00973 533 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 E2F5Q15329 346 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 GAB4Q2WGN9 574 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 TRMT5Q32P41 509 aaKnown RBP21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 DEFB107AQ8IZN7 70 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 HMGCLL1Q8TB92 370 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 TWIST2Q8WVJ9 160 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 PANX3Q96QZ0 392 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 COPS8Q99627 209 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 MTG2Q9H4K7 406 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 PKD2L2Q9NZM6 624 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 IL36AQ9UHA7 158 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 ASB1Q9Y576 335 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 E2F3O00716 465 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 ARHGEF7Q14155 803 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 PTK2BQ14289 1009 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 SQLEQ14534 574 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 CRY1Q16526 586 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 HCAR2Q8TDS4 363 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 SMARCD2Q92925 531 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 KCNA7Q96RP8 456 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 TUBB1Q9H4B7 451 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 KLHL42Q9P2K6 505 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 DKK3Q9UBP4 350 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 ZNF225Q9UK10 706 aa21.06■□□□□ 0.96
UBE2D3-216ENST00000503742 UPK3BL1B0FP48 263 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 UPK3BL2E5RIL1 263 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 CIB2O75838 187 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 MLYCDO95822 493 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 PCBP2Q15366 365 aaKnown RBP eCLIP21.05■□□□□ 0.969e-8■■■□□ 15.1
UBE2D3-216ENST00000503742 PREPLQ4J6C6 727 aaPredicted RBP21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 MYO1HQ8N1T3 1032 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 PDPRQ8NCN5 879 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 CFAP61Q8NHU2 1237 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 FGF13Q92913 245 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 LMAN2LQ9H0V9 348 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 EBF2Q9HAK2 575 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 PCDH12Q9NPG4 1184 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ELOVL2Q9NXB9 296 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 UTP6Q9NYH9 597 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 CDH22Q9UJ99 828 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 CDH23Q9H251 3354 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 PIP5K1BO14986 540 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ESRRBO95718 433 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 DCDC1P59894 354 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ACTR3P61158 418 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 MESP2Q0VG99 397 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ZNF805Q5CZA5 627 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 WLSQ5T9L3 541 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 RIPOR1Q6ZS17 1223 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 FRA10AC1Q70Z53 315 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 SYVN1Q86TM6 617 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 OR56A4Q8NGH8 313 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 DTX3LQ8TDB6 740 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ESAMQ96AP7 390 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ZFYVE19Q96K21 471 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 MYCBPQ99417 103 aaPredicted RBP21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 HGH1Q9BTY7 390 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 AKTIPQ9H8T0 292 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 SMOXQ9NWM0 555 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 NOP53Q9NZM5 478 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 EIF2B4Q9UI10 523 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 OARD1Q9Y530 152 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 PLXNA2O75051 1894 aa21.05■□□□□ 0.96
UBE2D3-216ENST00000503742 ATP6AP2A0A1C7CYW4 349 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 AIM2O14862 343 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 GPC4O75487 556 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 ATP6AP2O75787 350 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 NFATC1O95644 943 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 GNAZP19086 355 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 FSHRP23945 695 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 PRDX3P30048 256 aaKnown RBP21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 ATP4BP51164 291 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 C6orf163Q5TEZ5 329 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 HSD11B1LQ7Z5J1 315 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 PHYKPLQ8IUZ5 450 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 KYQ8NBH2 561 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 EBF3Q9H4W6 596 aa21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 NFKBIL1Q9UBC1 381 aaPredicted RBP21.04■□□□□ 0.96
UBE2D3-216ENST00000503742 OTOL1A6NHN0 477 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms