RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 A0A0G2JPF8 293 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 A0A1B0GUV1 79 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 C1orf226A1L170 272 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 PI4KAP2A4QPH2 592 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 HNRNPCL2B2RXH8 293 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 ERVV-2B6SEH9 535 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 HNRNPCL3B7ZW38 293 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 NDUFS3O75489 264 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 HNRNPCL4P0DMR1 293 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 CLCN3P51790 818 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 ZBED6P86452 979 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 EIF4A2Q14240 407 aaKnown RBP5.69□□□□□ -1.5
NIPBL-203ENST00000503274 KLHL22Q53GT1 634 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 C1orf141Q5JVX7 400 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 FRG2Q64ET8 278 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 C18orf65Q6ZTR6 163 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 BEST3Q8N1M1 668 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 PCDH20Q8N6Y1 951 aaKnown RBP5.69□□□□□ -1.5
NIPBL-203ENST00000503274 ANKRD52Q8NB46 1076 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 FIG4Q92562 907 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 GRAMD2BQ96HH9 432 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 IL17FQ96PD4 163 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 CMKLR1Q99788 373 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 KRTAP1-5Q9BYS1 174 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 PDZD7Q9H5P4 517 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 ACSL5Q9ULC5 683 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 KCNS2Q9ULS6 477 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-203ENST00000503274 RGPD2P0DJD1 1756 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 MAP2P11137 1827 aaKnown RBP5.69□□□□□ -1.5
NIPBL-203ENST00000503274 MYOM1P52179 1685 aa5.69□□□□□ -1.5
NIPBL-203ENST00000503274 DOT1LQ8TEK3 1739 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 PAPPAQ13219 1627 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 PRSS44E7EML9 344 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 SPINT2O43291 252 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 HCRTR2O43614 444 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 FASLGP48023 281 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 RXRGP48443 463 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
NIPBL-203ENST00000503274 ADIPOQQ15848 244 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 KCNT1Q5JUK3 1230 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 DCST1Q5T197 706 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 UNQ6126/PRO20091Q6UXV3 157 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF34Q8IZ26 560 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 POMGNT1Q8WZA1 660 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 USP6NLQ92738 828 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 APBB2Q92870 758 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 MTERF1Q99551 399 aaKnown RBP5.68□□□□□ -1.5
NIPBL-203ENST00000503274 SEPT5Q99719 369 aaPredicted RBP5.68□□□□□ -1.5
NIPBL-203ENST00000503274 ITPAQ9BY32 194 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 RETREG1Q9H6L5 497 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 SEBOXQ9HB31 216 aaPredicted RBP5.68□□□□□ -1.5
NIPBL-203ENST00000503274 HCFC1R1Q9NWW0 138 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 PDS5AQ29RF7 1337 aaKnown RBP5.68□□□□□ -1.5
NIPBL-203ENST00000503274 LY75O60449 1722 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 QSER1Q2KHR3 1735 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 CHD4Q14839 1912 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 CEP350Q5VT06 3117 aa5.68□□□□□ -1.5
NIPBL-203ENST00000503274 TRIP12Q14669 1992 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 IGHV4OR15-8A0A075B7B6 117 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF587BE7ETH6 402 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ACADMP11310 421 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 RARGP13631 454 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 CAPN3P20807 821 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 S1PR1P21453 382 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 UBA1P22314 1058 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 TMPOP42166 694 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 GEMIN4P57678 1058 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ERVFC1-1P60608 527 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 PDE1BQ01064 536 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 NAB2Q15742 525 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SOWAHCQ53LP3 525 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF280DQ6N043 979 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF530Q6P9A1 599 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SARM1Q6SZW1 724 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 GLDNQ6ZMI3 551 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SEPT14Q6ZU15 432 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 IKBIPQ70UQ0 350 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SATL1Q86VE3 508 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SFR1Q86XK3 245 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 RNF168Q8IYW5 571 aaPredicted RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 SRBD1Q8N5C6 995 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 RBMXL3Q8N7X1 1067 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 ZNF441Q8N8Z8 693 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 C1orf74Q96LT6 269 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 UBTD1Q9HAC8 227 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 CWC15Q9P013 229 aaKnown RBP5.67□□□□□ -1.5
NIPBL-203ENST00000503274 OR14J1Q9UGF5 321 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 MTMR6Q9Y217 621 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 AMDHD2Q9Y303 409 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 LYVE1Q9Y5Y7 322 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 IGSF1Q8N6C5 1336 aa5.67□□□□□ -1.5
NIPBL-203ENST00000503274 NCAPD2Q15021 1401 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 M0QZ24 198 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 TULP2O00295 520 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 SCAMP1O15126 338 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 DDNO94850 711 aaPredicted RBP5.66□□□□□ -1.5
NIPBL-203ENST00000503274 RFC4P35249 363 aa5.66□□□□□ -1.5
NIPBL-203ENST00000503274 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms