RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 NDUFS7O75251 213 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TOMM70O94826 608 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SIX3O95343 332 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 OR52Z1P0C646 297 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 KELP23276 732 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZNF75DP51815 510 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TAS2R38P59533 333 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SRSF1Q07955 248 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 HSPB3Q12988 150 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TUBB2AQ13885 445 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 HNF4GQ14541 408 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 MELKQ14680 651 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SLMAPQ14BN4 828 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 CTF1Q16619 201 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SMN1Q16637 294 aaKnown RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 FSCBQ5H9T9 825 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 C18orf63Q68DL7 685 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SHC4Q6S5L8 630 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 FAM198BQ6UWH4 519 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 MSANTD1Q6ZTZ1 278 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZNF534Q76KX8 674 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 PIWIL3Q7Z3Z3 882 aaKnown RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SPATA19Q7Z5L4 167 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 PIP4P1Q86T03 277 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 CCDC170Q8IYT3 715 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 SIX6OS1Q8N1H7 587 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TMEM199Q8N511 208 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 GCSAMQ8N6F7 178 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 DNAAF4Q8WXU2 420 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 MR1Q95460 341 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ERLEC1Q96DZ1 483 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 ERO1AQ96HE7 468 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 TUBB2BQ9BVA1 445 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 MOV10L1Q9BXT6 1211 aaKnown RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 DNAI2Q9GZS0 605 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 MCM9Q9NXL9 1143 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 FBXL2Q9UKC9 423 aa5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 WDR33Q9C0J8 1336 aaKnown RBP5.21□□□□□ -1.58
HMGB1P3-201ENST00000502802 IGHV4-28A0A0C4DH34 117 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 A0A0U1RQK1 487 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 A0A1W2PPM1 405 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZNF320A2RRD8 509 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 TMEM189-UBE2V1I3L0A0 370 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 PRRG2O14669 202 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 SLC16A5O15375 505 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZBTB43O43298 467 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 SSX4O60224 188 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 FGBP02675 491 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 LCATP04180 440 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 CELA2AP08217 269 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 FGF2P09038 288 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 PDGFRAP16234 1089 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 GABRA5P31644 462 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 RFX5P48382 616 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 NUDT6P53370 316 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 LIMK1P53667 647 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 CDK3Q00526 305 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 YWHAHQ04917 246 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 ACSM1Q08AH1 577 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 PPP2R5CQ13362 524 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 UBE2V1Q13404 147 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 PTK6Q13882 451 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 NFE2L1Q14494 772 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 NR1D2Q14995 579 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 RBMS2Q15434 407 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 GAGE2EQ4V326 116 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 DNTTIP2Q5QJE6 756 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 TYW3Q6IPR3 259 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 GAGE2AQ6NT46 116 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 IYDQ6PHW0 289 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 FIGLAQ6QHK4 219 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 ZBTB49Q6ZSB9 765 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 UNC45BQ8IWX7 931 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 CEP57L1Q8IYX8 460 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 CARNMT1Q8N4J0 409 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 SLC4A11Q8NBS3 891 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 UTP15Q8TED0 518 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 WFIKKN2Q8TEU8 576 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 OIT3Q8WWZ8 545 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 ATL1Q8WXF7 558 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 LRRC3BQ96PB8 259 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 OLFM1Q99784 485 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 TRNAU1APQ9NX07 287 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 DDX43Q9NXZ2 648 aaKnown RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 GAGE2DQ9UEU5 116 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 NCANO14594 1321 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 TAF1P21675 1872 aa5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 AQRO60306 1485 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P3-201ENST00000502802 A0A087WV48 116 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 IGLV5-39A0A0G2JS06 123 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 HTR3EA5X5Y0 456 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 GOLGA6L9A6NEM1 432 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 SMTNL1A8MU46 457 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 DNM1LO00429 736 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 SOCS6O14544 535 aa5.19□□□□□ -1.58
HMGB1P3-201ENST00000502802 TSPAN1O60635 241 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms