RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 TMEM114B3SHH9 223 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 SBK3P0C264 359 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 TROVE2P10155 538 aaKnown RBP eCLIP24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 DNAJB13P59910 316 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 ZP2Q05996 745 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 NEK5Q6P3R8 708 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 MYO1HQ8N1T3 1032 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 PPP4R1Q8TF05 950 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 SLC30A3Q99726 388 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 ELAC2Q9BQ52 826 aaKnown RBP24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 WNT16Q9UBV4 365 aa24.07■■□□□ 1.44
PPP1R3F-205ENST00000495799 IGLON5A6NGN9 336 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 KERAO60938 352 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 SNNO75324 88 aaPredicted RBP24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 TPBGLP0DKB5 382 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 ITGB6P18564 788 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 CD72P21854 359 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 KIAA1324Q6UXG2 1013 aaKnown RBP24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 PIGWQ7Z7B1 504 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 CRLF3Q8IUI8 442 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 CACNA2D3Q8IZS8 1091 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 ANKS4BQ8N8V4 417 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 LKAAEAR1Q8TD35 194 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 EEF1AKMT1Q8WVE0 214 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 PTERQ96BW5 349 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 EPHX3Q9H6B9 360 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 FBXL21Q9UKT6 434 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 RNF112Q9ULX5 631 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 ATG2BQ96BY7 2078 aa24.06■■□□□ 1.44
PPP1R3F-205ENST00000495799 TCRBV21S2A2A0A5A6 115 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 DLX3O60479 287 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SNX3O60493 162 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ATG13O75143 517 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SNUPNO95149 360 aaKnown RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 TGDSO95455 350 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SOD1P00441 154 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 CHRNB1P11230 501 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ENO3P13929 434 aaPredicted RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 TEAD1P28347 426 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ADPRHP54922 357 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SGCGQ13326 291 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 GTF2H3Q13889 308 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 MAP7D1Q3KQU3 841 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 TMEM92Q6UXU6 159 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ADAMTSL4Q6UY14 1074 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ZCCHC23Q6ZST2 131 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SPATA21Q7Z572 469 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 MRGPRX1Q96LB2 322 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 MTF2Q9Y483 593 aaPredicted RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 CHURC1-FNTBB4DL54 471 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 BTN3A1O00481 513 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 INPP4BO15327 924 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 TSPAN12O95859 305 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SERPINB5P36952 375 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SLC1A6P48664 564 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 DGKEP52429 567 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ABCE1P61221 599 aaKnown RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 NFKB2Q00653 900 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 OCRLQ01968 901 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 TMEM115Q12893 351 aaPredicted RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 PLEKHS1Q5SXH7 462 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 DET1Q7L5Y6 550 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 RAB44Q7Z6P3 723 aaPredicted RBP24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 ADAMTSL2Q86TH1 951 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 CCDC197Q8NCU1 140 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SGF29Q96ES7 293 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SEC16BQ96JE7 1060 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 NELL2Q99435 816 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 PLCD4Q9BRC7 762 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 SLC6A17Q9H1V8 727 aa24.05■■□□□ 1.44
PPP1R3F-205ENST00000495799 F5P12259 2224 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 VEGFDO43915 354 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 RNGTTO60942 597 aaKnown RBP24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 MTX2O75431 263 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 IPO13O94829 963 aaKnown RBP24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 NDUFV2P19404 249 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 PNCKQ6P2M8 343 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 ZNF771Q7L3S4 317 aaPredicted RBP24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 OR6Y1Q8NGX8 325 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 HIC2Q96JB3 615 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 ZNF514Q96K75 400 aaPredicted RBP24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 ATOH8Q96SQ7 321 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 TRIM55Q9BYV6 548 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 TRIM39Q9HCM9 518 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 NCKIPSDQ9NZQ3 722 aa24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 CNOT6Q9ULM6 557 aaKnown RBP24.04■■□□□ 1.44
PPP1R3F-205ENST00000495799 GSTM1P09488 218 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 AOAHP28039 575 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 PRLHRP49683 370 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 GSTM4Q03013 218 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 OR4D1Q15615 310 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 SYT13Q7L8C5 426 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 PIWIL4Q7Z3Z4 852 aaKnown RBP24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 HORMAD1Q86X24 394 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 GATA5Q9BWX5 397 aaPredicted RBP24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 LMAN1LQ9HAT1 526 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 KLHL14Q9P2G3 628 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 THEGQ9P2T0 379 aa24.03■■□□□ 1.44
PPP1R3F-205ENST00000495799 NPEPPSL1A6NEC2 478 aa24.02■■□□□ 1.44
PPP1R3F-205ENST00000495799 A8MT66 165 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms