RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 MXD3Q9BW11 206 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 RAD21L1Q9H4I0 556 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 WDR6Q9NNW5 1121 aaKnown RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 NMRK1Q9NWW6 199 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 SUCLA2Q9P2R7 463 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 CRNNQ9UBG3 495 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 FETUBQ9UGM5 382 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 SRP68Q9UHB9 627 aaKnown RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 C19orf53Q9UNZ5 99 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 CNTN6Q9UQ52 1028 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 PCDHGB1Q9Y5G3 927 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 ZFP37Q9Y6Q3 630 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-222ENST00000494672 KIF7Q2M1P5 1343 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 TTC41PQ6P2S7 1318 aa4.67□□□□□ -1.66
CCDC66-222ENST00000494672 TCRBV7S3A2A0A539 114 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 DENND3A2RUS2 1198 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CTAGE15A4D2H0 777 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 OR6C74A6NCV1 312 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 RRN3P2A6NIE6 340 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 EFCAB8A8MWE9 144 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 BTBD18B2RXH4 712 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 SPECC1L-ADORA2AF8WAN1 911 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 H3BQV1 296 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 GOLGA8RI6L899 631 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 KMOO15229 486 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 TACC1O75410 805 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 SLC22A3O75751 556 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 TOMM70O94826 608 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ABCB1P08183 1280 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CTAGE8P0CG41 777 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CALM1P0DP23 149 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CALM2P0DP24 149 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CALM3P0DP25 149 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 KRT9P35527 623 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 HSPA13P48723 471 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ALDH3A2P51648 485 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 S100A12P80511 92 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 MRPS5P82675 430 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 TFAP4Q01664 338 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 OTUD4Q01804 1114 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 BTKQ06187 659 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 KRT32Q14532 448 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 NCF4Q15080 339 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 MEA1Q16626 185 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 NFIL3Q16649 462 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ALG11Q2TAA5 492 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 TBRG1Q3YBR2 411 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 FAM171A1Q5VUB5 890 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 FAM205BPQ63HN1 556 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ATL3Q6DD88 541 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 SLC30A6Q6NXT4 461 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 C15orf52Q6ZUT6 534 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 USP43Q70EL4 1123 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ZNF367Q7RTV3 350 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CTAGE6Q86UF2 777 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 SLC51BQ86UW2 128 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 VPS36Q86VN1 386 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CTAGE4Q8IX94 777 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ST13P4Q8IZP2 240 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 NIPA2Q8N8Q9 360 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 OR6S1Q8NH40 331 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 RUBCNQ92622 972 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ZKSCAN4Q969J2 545 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 HDAC11Q96DB2 347 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CCDC43Q96MW1 224 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 TMEM237Q96Q45 408 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 PPP1R10Q96QC0 940 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 PUS3Q9BZE2 481 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 ACPTQ9BZG2 426 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 HIPK3Q9H422 1215 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 STN1Q9H668 368 aaKnown RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 DCTPP1Q9H773 170 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CCDC177Q9NQR7 707 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-222ENST00000494672 PLSCR4Q9NRQ2 329 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 FNIP2Q9P278 1114 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 FAM153AQ9UHL3 310 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 VANGL2Q9ULK5 521 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 NUDCQ9Y266 331 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 RAP2CQ9Y3L5 183 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 PKP3Q9Y446 797 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 PCDHA10Q9Y5I2 948 aa4.66□□□□□ -1.66
CCDC66-222ENST00000494672 CCDC144AA2RUR9 1427 aa4.65□□□□□ -1.66
CCDC66-222ENST00000494672 FHAD1B1AJZ9 1412 aa4.65□□□□□ -1.66
CCDC66-222ENST00000494672 A0A1B0GWJ7 208 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 FRMD3A2A2Y4 597 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 ZSCAN5CA6NGD5 496 aaPredicted RBP4.65□□□□□ -1.67
CCDC66-222ENST00000494672 B4E171 279 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 K7EPI3 171 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 NDUFS8O00217 210 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 ASNA1O43681 348 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 SMPD2O60906 423 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 NOL3O60936 208 aaKnown RBP4.65□□□□□ -1.67
CCDC66-222ENST00000494672 KERAO60938 352 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 CLN5O75503 358 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 CRTAPO75718 401 aaPredicted RBP4.65□□□□□ -1.67
CCDC66-222ENST00000494672 KLHL2O95198 593 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 NAGAP17050 411 aa4.65□□□□□ -1.67
CCDC66-222ENST00000494672 PRKACAP17612 351 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms