RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 BOCQ9BWV1 1114 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 PARD6BQ9BYG5 372 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 CDC42EP4Q9H3Q1 356 aaKnown RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 OSGEPL1Q9H4B0 414 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 LRRC4CQ9HCJ2 640 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 TMEM9BQ9NQ34 198 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 MRPL40Q9NQ50 206 aaKnown RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 FBXO6Q9NRD1 293 aaPredicted RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 TRNAU1APQ9NX07 287 aaKnown RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 MARCH4Q9P2E8 410 aaPredicted RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 TMPRSS11EQ9UL52 423 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 GPR34Q9UPC5 381 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
VEGFA-214ENST00000493786 IKBKGQ9Y6K9 419 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 LRRK1Q38SD2 2015 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 FRYLO94915 3013 aa7.5□□□□□ -1.21
VEGFA-214ENST00000493786 MYLKQ15746 1914 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 IGLV3-16A0A075B6K0 115 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TCRBV9S1A1TA0A576 114 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CHUKO15111 745 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 OR1I1O60431 355 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 KCNJ13O60928 360 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SDC3O75056 442 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 DNAJC6O75061 913 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 PIAS2O75928 621 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TRIM16O95361 564 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 FAM153BP0C7A2 387 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 ZNF883P0CG24 379 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SLC2A4P14672 509 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 RPS3P23396 243 aaKnown RBP eCLIP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 EPHA8P29322 1005 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 FMO4P31512 558 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 ACTR1BP42025 376 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CD151P48509 253 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 PRLHRP49683 370 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SLC12A2P55011 1212 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 ADARP55265 1226 aaKnown RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 GPX6P59796 221 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 ACTR1AP61163 376 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 MPP1Q00013 466 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 B4GALNT1Q00973 533 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 IL9RQ01113 521 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 BNC1Q01954 994 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CTBP1Q13363 440 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 BIRC2Q13490 618 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SEMA3AQ14563 771 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TCEA2Q15560 299 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 UAP1L1Q3KQV9 507 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 FAM153CQ494X1 144 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 KHDC1Q4VXA5 237 aaKnown RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TEDDM1Q5T9Z0 273 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TRMT10BQ6PF06 316 aaKnown RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TAOK1Q7L7X3 1001 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 STRA8Q7Z7C7 330 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 GALNT7Q86SF2 657 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 AMZ2Q86W34 360 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 DENND6AQ8IWF6 608 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CNTN4Q8IWV2 1026 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 UNC5BQ8IZJ1 945 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 DCLK2Q8N568 766 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 PPM1NQ8N819 430 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 C2CD4AQ8NCU7 369 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 ZNF548Q8NEK5 533 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 UBLCP1Q8WVY7 318 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 LPGAT1Q92604 370 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 GLMNQ92990 594 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SCARF2Q96GP6 870 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CPNE1Q99829 537 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TIMM29Q9BSF4 260 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CCM2Q9BSQ5 444 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 LRRC61Q9BV99 259 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TMEM168Q9H0V1 697 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TM7SF3Q9NS93 570 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 KLC4Q9NSK0 619 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 EVA1BQ9NVM1 165 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 MOCS1Q9NZB8 636 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CORO1CQ9ULV4 474 aaPredicted RBP7.49□□□□□ -1.21
VEGFA-214ENST00000493786 KCNK6Q9Y257 313 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 DNAJC16Q9Y2G8 782 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CRYL1Q9Y2S2 319 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 PRKAB1Q9Y478 270 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 COMMD10Q9Y6G5 202 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 CSNK1G3Q9Y6M4 447 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 SCN8AQ9UQD0 1980 aa7.49□□□□□ -1.21
VEGFA-214ENST00000493786 TNRC6BQ9UPQ9 1833 aaKnown RBP7.48□□□□□ -1.21
VEGFA-214ENST00000493786 EXOC1LA0A1B0GW35 172 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 MGAT4DA6NG13 374 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 FAM159BA6NKW6 160 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 PDZK1P1A8MUH7 402 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 KPNA5O15131 536 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 FFAR2O15552 330 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 RIPK2O43353 540 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 PCDHGA12O60330 932 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 VPS26AO75436 327 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 POP7O75817 140 aaKnown RBP7.48□□□□□ -1.21
VEGFA-214ENST00000493786 S1PR4O95977 384 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 APOA4P06727 396 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 INHBAP08476 426 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 ABHD2P08910 425 aa7.48□□□□□ -1.21
VEGFA-214ENST00000493786 MYBL2P10244 700 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms