RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PDILTQ8N807 584 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 OR8K5Q8NH50 307 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 SMPDL3BQ92485 455 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 DUX3Q96PT4 197 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 NUDCD1Q96RS6 583 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 NCAPGQ9BPX3 1015 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 PLK3Q9H4B4 646 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 TFB2MQ9H5Q4 396 aaKnown RBP4.04□□□□□ -1.76
ITGB1-216ENST00000493758 KAT14Q9H8E8 782 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 KRT84Q9NSB2 600 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 OGFRQ9NZT2 677 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 ACAD8Q9UKU7 415 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 CORO1CQ9ULV4 474 aaPredicted RBP4.04□□□□□ -1.76
ITGB1-216ENST00000493758 EXO1Q9UQ84 846 aaKnown RBP4.04□□□□□ -1.76
ITGB1-216ENST00000493758 GAB2Q9UQC2 676 aa4.04□□□□□ -1.76
ITGB1-216ENST00000493758 HS6ST1O60243 411 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 ZNF217O75362 1048 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 CFC1BP0CG36 223 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 CFC1P0CG37 223 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PON1P27169 355 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PPARGP37231 505 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 MSH2P43246 934 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 MRGPRG-AS1Q2M3A8 158 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 HAUS3Q68CZ6 603 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 SLC35E4Q6ICL7 350 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 ADAM5Q6NVV9 412 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PLXDC2Q6UX71 529 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PACS1Q6VY07 963 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 SLC26A9Q7LBE3 791 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PIWIL4Q7Z3Z4 852 aaKnown RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 FOXP4Q8IVH2 680 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 WDTC1Q8N5D0 677 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 RBM15BQ8NDT2 890 aaKnown RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 FAM76AQ8TAV0 307 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 LRRC8CQ8TDW0 803 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 ZNF501Q96CX3 271 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 CMTM3Q96MX0 182 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 ZHX3Q9H4I2 956 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 C2orf42Q9NWW7 574 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 ZNF624Q9P2J8 865 aaPredicted RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 DBNLQ9UJU6 430 aaKnown RBP4.03□□□□□ -1.76
ITGB1-216ENST00000493758 CMAHPQ9Y471 501 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 WDR81Q562E7 1941 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 PRAG1Q86YV5 1406 aa4.03□□□□□ -1.76
ITGB1-216ENST00000493758 H0YIN7 160 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 PTP4A3O75365 173 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 PAK4O96013 591 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 FGF5P12034 268 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 TNFAIP3P21580 790 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 NR2F2P24468 414 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 MMP15P51511 669 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 CDH8P55286 799 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 OTUD3Q5T2D3 398 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 ZNF449Q6P9G9 518 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 MAATS1Q7Z4T9 603 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 ARID3BQ8IVW6 561 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 GRAPLQ8TC17 118 aaPredicted RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 SKA1Q96BD8 255 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 SEMA3CQ99985 751 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 RBM4Q9BWF3 364 aaKnown RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 SMC4Q9NTJ3 1288 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 FBXL17Q9UF56 701 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 R3HDM2Q9Y2K5 976 aaKnown RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 YIPF1Q9Y548 306 aa4.02□□□□□ -1.77
ITGB1-216ENST00000493758 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.02□□□□□ -1.77
ITGB1-216ENST00000493758 OR2M5A3KFT3 312 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 GPC4O75487 556 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 KCNK5O95279 499 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 GH2P01242 217 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 RB1P06400 928 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 TUBBP07437 444 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 PRSS1P07477 247 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 RARGP13631 454 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 GARSP41250 739 aaKnown RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ARF3P61204 181 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 TUBB4BP68371 445 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ARF1P84077 181 aaKnown RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 WDR38Q5JTN6 314 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ZDHHC20Q5W0Z9 365 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 SLC27A1Q6PCB7 646 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 CHST9Q7L1S5 443 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 LONP2Q86WA8 852 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 GALNT13Q8IUC8 556 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 CEP97Q8IW35 865 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 TEX11Q8IYF3 940 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 TMTC2Q8N394 836 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 CNBD1Q8NA66 436 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 TM9SF4Q92544 642 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ZKSCAN4Q969J2 545 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 NEUROD6Q96NK8 337 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 SLX1AQ9BQ83 275 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ZBTB20Q9HC78 741 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 DNAJB4Q9UDY4 337 aa4.01□□□□□ -1.77
ITGB1-216ENST00000493758 ERRFI1Q9UJM3 462 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 FAF1Q9UNN5 650 aaPredicted RBP4.01□□□□□ -1.77
ITGB1-216ENST00000493758 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
ITGB1-216ENST00000493758 BLOC1S5-TXNDC5H3BN57 136 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms