RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CTAGE4Q8IX94 777 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 NXPE1Q8N323 547 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 OTUD6BQ8N6M0 293 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 BBOF1Q8ND07 529 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 LSM14AQ8ND56 463 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 OR6P1Q8NGX9 317 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 OR4C6Q8NH72 309 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 SNIP1Q8TAD8 396 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 PEX13Q92968 403 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 HDAC10Q969S8 669 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ZNF669Q96BR6 464 aaPredicted RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 ZNF778Q96MU6 729 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 GSDMCQ9BYG8 508 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CLPBQ9H078 707 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 PRORYQ9H606 182 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 RMI1Q9H9A7 625 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 CHRAC1Q9NRG0 131 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 NLGN3Q9NZ94 848 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ANAPC5Q9UJX4 755 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
CTSA-209ENST00000493522 PRKAB1Q9Y478 270 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 MAD1L1Q9Y6D9 718 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CSNK1G3Q9Y6M4 447 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 ATMQ13315 3056 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 CFAP46Q8IYW2 2715 aa11.44□□□□□ -0.58
CTSA-209ENST00000493522 RP1P56715 2156 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 SDR42E2A6NKP2 422 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 GPR89AB7ZAQ6 455 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CFAP99D6REC4 459 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 LMO7DNF2Z398 122 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 SMAPO00193 183 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 TRIM38O00635 465 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 GRID2O43424 1007 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 SIGLEC6O43699 453 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 VEGFDO43915 354 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 NUAK1O60285 661 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 BANF1O75531 89 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CDK14O94921 469 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 GOT2P00505 430 aaKnown RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 FUCA1P04066 466 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 GPR89BP0CG08 455 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 PRSS56P0CW18 603 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 RALBP11234 206 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 ACP5P13686 325 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CKMT2P17540 419 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 AK4P27144 223 aaPredicted RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 FOXN2P32314 431 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 MAGEA3P43357 314 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 DAB2P98082 770 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 ACVR1Q04771 509 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 INSCQ1MX18 579 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 BBS9Q3SYG4 887 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 GPR33Q49SQ1 333 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 PYCR3Q53H96 274 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 HIBCHQ6NVY1 386 aaPredicted RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 SLC30A9Q6PML9 568 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 DET1Q7L5Y6 550 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CHST15Q7LFX5 561 aaPredicted RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 LRRTM4Q86VH4 590 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 SERPINA9Q86WD7 417 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CEP112Q8N8E3 955 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CCL4L1Q8NHW4 92 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 STAMBPL1Q96FJ0 436 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 DCUN1D1Q96GG9 259 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 SCARF2Q96GP6 870 aaPredicted RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 DUSP23Q9BVJ7 150 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 KIFC1Q9BW19 673 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 TREX1Q9NSU2 369 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CATSPERZQ9NTU4 200 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 TRNAU1APQ9NX07 287 aaKnown RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 SIRPGQ9P1W8 387 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 CLCA2Q9UQC9 943 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 PLEKHM1Q9Y4G2 1056 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 PCYT1BQ9Y5K3 369 aaPredicted RBP11.43□□□□□ -0.58
CTSA-209ENST00000493522 PTPRQQ9UMZ3 2332 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 MGAQ8IWI9 3026 aa11.43□□□□□ -0.58
CTSA-209ENST00000493522 TRBV5-4A0A0C4DH59 114 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 FAM237BA0A1B0GVD1 139 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 OR2AG2A6NM03 316 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 B4DGG1 531 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 YY2O15391 372 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 PRB1P04280 392 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 GIMD1P0DJR0 217 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 PAMP19021 973 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 PSMA3P25788 255 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 ACRV1P26436 265 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 ACTR1BP42025 376 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 ARL4CP56559 192 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 ACTR1AP61163 376 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 CTBSQ01459 385 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 DHX9Q08211 1270 aaKnown RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 TMEM115Q12893 351 aaPredicted RBP11.42□□□□□ -0.58
CTSA-209ENST00000493522 LRP8Q14114 963 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 DBN1Q16643 649 aa11.42□□□□□ -0.58
CTSA-209ENST00000493522 HIF1AQ16665 826 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms