RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 LATS1O95835 1130 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 FDPSP14324 419 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GNLYP22749 145 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ADCY8P40145 1251 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CAMLGP49069 296 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ACTR1AP61163 376 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GAD2Q05329 585 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 TEFQ10587 303 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 COX10Q12887 443 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 IKQ13123 557 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NAA25Q14CX7 972 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 LARS2Q15031 903 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NAB2Q15742 525 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 RBM20Q5T481 1227 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 STRIP1Q5VSL9 837 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ANKRD54Q6NXT1 300 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CAVIN1Q6NZI2 390 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC73Q6ZRK6 1079 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MTSS1LQ765P7 747 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MIER3Q7Z3K6 550 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF679Q8IYX0 411 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SRFBP1Q8NEF9 429 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 FAM71CQ8NEG0 241 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF75CPQ92670 426 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CLMNQ96JQ2 1002 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MAK16Q9BXY0 300 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KLHL4Q9C0H6 718 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MAGEE1Q9HCI5 957 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MLXIPLQ9NP71 852 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ATAD3AQ9NVI7 634 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SYBUQ9NX95 663 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GDAP2Q9NXN4 497 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 RAI14Q9P0K7 980 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MOSPD1Q9UJG1 213 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 OAZ3Q9UMX2 235 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NFAT5O94916 1531 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 RGPD3A6NKT7 1758 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 RGPD4Q7Z3J3 1758 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 A1L4Q6 167 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NUDT19A8MXV4 375 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PATE3B3GLJ2 98 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 AKR1B15C9JRZ8 316 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KIF1CO43896 1103 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PPFIA2O75334 1257 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MED24O75448 989 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 STAM2O75886 525 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SPARCP09486 303 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 HSPA5P11021 654 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ITGALP20701 1170 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SP100P23497 879 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PBLDP30039 288 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SLC6A6P31641 620 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MC5RP33032 325 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GSTM5P46439 218 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GLIPR1P48060 266 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PTENP60484 403 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ST8SIA6P61647 398 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ROR2Q01974 943 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ITIH3Q06033 890 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ACSM1Q08AH1 577 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SYT16Q17RD7 645 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ERCC6LQ2NKX8 1250 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PDCD4Q53EL6 469 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 PLEKHO1Q53GL0 409 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CACHD1Q5VU97 1274 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MCTP1Q6DN14 999 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NCAPH2Q6IBW4 605 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ARHGEF18Q6ZSZ5 1173 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 DHX40Q8IX18 779 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KRT222Q8N1A0 295 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KDM8Q8N371 416 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 EXD1Q8NHP7 514 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 GABPB2Q8TAK5 448 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 TIMP4Q99727 224 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 TEX13BQ9BXU2 312 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SIL1Q9H173 461 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 WNT5BQ9H1J7 359 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 CDT1Q9H211 546 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SH2D4AQ9H788 454 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 SPAG4Q9NPE6 437 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 INTS13Q9NVM9 706 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ALKBH4Q9NXW9 302 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ROBO1Q9Y6N7 1651 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 NPHP4O75161 1426 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 YTHDC2Q9H6S0 1430 aaKnown RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 MAPK8IP3Q9UPT6 1336 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 COL3A1P02461 1466 aaPredicted RBP2.93□□□□□ -1.94
UBXN4-208ENST00000490163 ABCC11Q96J66 1382 aa2.93□□□□□ -1.94
UBXN4-208ENST00000490163 RREB1Q92766 1687 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CYP2D7A0A087X1C5 515 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ILVBLA1L0T0 632 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CASTOR2A6NHX0 329 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 KLRF2D3W0D1 207 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 H7C1Q1 480 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 SMIM22K7EJ46 135 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 AP3B1O00203 1094 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms